Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0150 ATGTCGGACTCGGCCAAGGTGCGATTGGTGCGTTGCCCCAAGTGTCAAAACCTTCTTCCCGAACTCGCCGATTACTCTGTCTACCAATGTGGTGGTTGTGGTGCCGTTCTTCGAGCGAAGCATAAAGGTTATGTAAGTGGTAGCTTGTCGGATGAGGGGAAGGTTGGCGGAGATTCTGGAAAATCAGAAAATTCGTTGGAGAAAGGCTTAGTTGATCGTAGTGATGCTTCGGATGTTGATGCTAAGTCCAGCAGTGGTCCCTCGAGGGATGATAATCAAAGGGATGTGGATAAAGTAGATAACATGGACGAGAGGTTTCAGAATCAATCAGAGGATACTGGTGAGAAAGGGGTATtggatgatgatgttgatgttgatgttaaTGTTAATGGGAATAAAGATGAAGTGGCTAAAGCAGAAGGAAGAGAACAGGAGGAACCTAAGTCTCAAGTTGGTCTTGAGAATGGGTCTAAATTCTCTGGGAGAATTTCTAATTGGCAGAATGAGGAGAGAAGTGGGATGAAGGGGTTTTGGAGAAAGCCACGAGCTGATATGGAAAGTGTGAGATTTTCCACTTCGAAGTATCCTGATGAGGGACCTTCGAATGGCTTTTCCAGTTTTTCTAGTAGTTACATGGAACCGTGGAGGAATCATAAAGAAGCAAATGGTGTGAACATGGTTCAGCACCTTGAGCAGGATCGAGCTGAGCTTCTAAGGAAGCTGGATGAGTTGAAGGTACACCTCAGTAAGTCTTCTGAAATGGTTaacaaccaaaaagaaaaggttcTTCCTGACGAAAGGATGATTCCTCCAGATCCTCATGCTTATGGTGGCTCTGATCCTTGGTTTTCGGATGGATCATCAGGGTTGAACAGAACTTCAAGGCAATTTTTTGCAACTGATAAGCATGTGGCAGGTTCCACTCATTTCAATTATCATCATGATCCGTATTCTTATACAAGTGGTCATGACAGGTCTATGCCCAACTTCCCTCCTTCAATGCATAATCCAAATCGATATGGGGATCCTTTTGCATCCCAAATGCTGAGGAGAGGTCCACACCAGTTCCCGCAACAACCATTGCATCCCTACTATCCCGGACGGTACGTTGATACTAATCCAGACTCATATGAACTATATGCACATAATGCAATGCTTCACCCGCCTAGTTGCTCTTGTTTCCATTGCTATGATAACAAACGAAGAGGTTCAGTGCCGGCGCCACCTGCTTCATTCATTAACAGTAGATTCCCTGATGCCCCAAATGATCCTATGTTATACCCTCACGAGATCCCAGGGGCATTTGGTCCACATGTTCATAATTCTAGAACTGCCATTCCTCCCGTGGCCTATCGTGAAAAACAGTTACATGCAAGATGGGCTAGTGACTTAAACTCTGAGATGGGTGGCTTTGTTCGAAGCCGTCCTCGCAAAGTAATGTTAGCTAGTAGTAGCCAGCGTTGCTATCCGGTAGCTGGTGGTTCGCCCTTCATCTCATGTCATAATTGCTTTGCGTTGCTGCTGCTGCCGAAAAAAGCATTGGTTCTGGTGAAAAACCATCAGCAAAAAGTGCAATGTGGGGCTTGTTCTTCAGGAATCAGCTTTGCTGTCATCAATAAGAAGCTGGTTATTTCGCCTAATTTAGAAACAAAGGGAGTTCCCTCAAGAGGTGATAATAGCTCTAATGAGGTTGTGAGTAGCCGAATGTCACATTCTCGTGGTCATGTGAACAGGACTGGTGCTAACTTCTCTTCTGATGATTATTCTGGTTATGATTTTCATTCAGTGGACAGGGAACCTCTTTCTCTGGCTGCTTTGAACTCTAACAAGTCTCGGGAGATGCAGAGTTTTCGTTCTTCATCTCTCAGTACCTCCGAAGATGAAAATAGCCCGGAAGCAATGATTGCTCCAAGGGAGGCCACTAAGTCCATTCCTCAGCCAACTACAGACTCTCTATCTCCTCCTCCTGCTGGTTCACCTTTGCAGGAGTATTTTGATTACTCCAATAATAACCATGCAGTAAATCGGTATGGAAAAGGAAACCAAAGTAGTCGCTCAGAGCAAGAGAAGACAAAAGTGGACAAGATGTCGTCGCGTCAAAATTCTTTGAAAGAGGCAGCACTTGCAACTGAGATGGATGTCCATGATTATTCTAACACTGGGGTTTCCCAGGATTCTGGCGATGCTAGCCGAGAACATGATCATCCTAGATCCAACAGAGGGGGTGAATCATTTTTTGCAAACATTATCAAGAAAAGTTTCCGAGATTTCTCCCGATCTAATCATACAGATGATCGTAGCAAAATCAATGTTACTGTAAATGGGCAGCCCATATCAGATCGTGTCCTCAAGAAGGCTGAAAAGCCAGCGGGACCAATCCAGCCTGGAAATTATTGGTATGATTTTAGGGCTGGATTTTGGGGTGTCATGGGAGGGCCTTGTCTTGGAATAATTCCTCCATTTATAGAAGAGTTCAATCATCCCTTGCCAGACAAATGTTCTGGGGGGAATACTGGTGTTTTTGTAAATGGTAGGGAACTTCACCAAAAAGACTTGGATTTGCTAGCTGGGAGAGGACTTCCCCCAGATAGAGATAGATCTTATATTGTTGAGATTTCTGGGAGAGTCCTGGATGAAGACACAGGTGAAGAGCTGGACAGCCTTGGCAAACTTGCACCAACAGTGGAGAAAGTGAAGCATGGATTCGGCATGAAAGTACCTAGAGCAGCTACATAA 2736 0.4415 MSDSAKVRLVRCPKCQNLLPELADYSVYQCGGCGAVLRAKHKGYVSGSLSDEGKVGGDSGKSENSLEKGLVDRSDASDVDAKSSSGPSRDDNQRDVDKVDNMDERFQNQSEDTGEKGVLDDDVDVDVNVNGNKDEVAKAEGREQEEPKSQVGLENGSKFSGRISNWQNEERSGMKGFWRKPRADMESVRFSTSKYPDEGPSNGFSSFSSSYMEPWRNHKEANGVNMVQHLEQDRAELLRKLDELKVHLSKSSEMVNNQKEKVLPDERMIPPDPHAYGGSDPWFSDGSSGLNRTSRQFFATDKHVAGSTHFNYHHDPYSYTSGHDRSMPNFPPSMHNPNRYGDPFASQMLRRGPHQFPQQPLHPYYPGRYVDTNPDSYELYAHNAMLHPPSCSCFHCYDNKRRGSVPAPPASFINSRFPDAPNDPMLYPHEIPGAFGPHVHNSRTAIPPVAYREKQLHARWASDLNSEMGGFVRSRPRKVMLASSSQRCYPVAGGSPFISCHNCFALLLLPKKALVLVKNHQQKVQCGACSSGISFAVINKKLVISPNLETKGVPSRGDNSSNEVVSSRMSHSRGHVNRTGANFSSDDYSGYDFHSVDREPLSLAALNSNKSREMQSFRSSSLSTSEDENSPEAMIAPREATKSIPQPTTDSLSPPPAGSPLQEYFDYSNNNHAVNRYGKGNQSSRSEQEKTKVDKMSSRQNSLKEAALATEMDVHDYSNTGVSQDSGDASREHDHPRSNRGGESFFANIIKKSFRDFSRSNHTDDRSKINVTVNGQPISDRVLKKAEKPAGPIQPGNYWYDFRAGFWGVMGGPCLGIIPPFIEEFNHPLPDKCSGGNTGVFVNGRELHQKDLDLLAGRGLPPDRDRSYIVEISGRVLDEDTGEELDSLGKLAPTVEKVKHGFGMKVPRAAT 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0150 911 MobiDBLite consensus disorder prediction 47 166 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 552 581 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 683 699 - -
Ssu4g0150 911 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 909 IPR040244 GO:1900150
Ssu4g0150 911 Coils Coil 227 247 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 606 744 - -
Ssu4g0150 911 Pfam Probable zinc-ribbon domain 492 537 IPR021480 -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 548 581 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 606 630 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 65 149 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 150 166 - -
Ssu4g0150 911 MobiDBLite consensus disorder prediction 663 682 - -
Ssu4g0150 911 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0150 Ssu-Chr4 2513287 2517479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0150 - - gmx:100795121 1642.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0150 4 2513287 2517479 Ssu4g0150 4 2513287 2517479 ECH
Ssu4g0150 4 2513287 2517479 Ssu4g2918 4 74525204 74529419 PCT