Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2884 atggaaagaagaggaaaagttcTGGAGGGAGAGGACAAAAGGGGTGGATTAATGGTGGAAAAGTTGAGGCAAGGGGTTTTGGTGGGGAAAAAGGGAGGGCCTAGTACACCACCACCCACATGGAGACTGGAGCTTCCATCTCAGCACAATGGTAGTGACAGGGTTCAAGAGTTTCTTAACTTTCCCACTTCAACCCTTTCTGCTAGAAAGCTCTGTTCCAACATCTGGGAAGTTCTGCCCCACCAACACACCCCTCTTCCCAAAATGAACAAGCATGGCACCAccctccgccgccgccgccgccgccgccaccgCCGCAGCCTCCACCACCACCCTAAGGACACAGGTTCTCAAGTGAACAACCAATTGGCTGAGCCTCCAGACACCCCTTCTGATTCTGATCAGCCGGCATCATCAGCTAGTAGCTCGAGAAGGCATGTTGCAGCATCACTTGTTCAGCACCGTAGATCAGTAGAAAGAAATGGCTGTGCTCTACAGCCTGTATCCCCTGCTTGTTACAGTAGCTCAGTGGAAGTGGCACCATATAAATGTGCAGCAACCCCCACAAGCTCCATAGACTTCAAAGGTAGGATTAGAGAGTCTAGTTACAACCTTAAAACGTCCACAGAATTACTTAAGGTACTCAACCGTATTTGGAGCCTTGAAGAACAGCAGGCATCAAATTTATCCGTAGTGAAAACCTTAAAAACGGAACTAGATTGCTCTCAGGCACGGATGAAAGAGTTACTGCAAGAGAAGCAAATGAATAGGCAGGAAATGGAGAACTTAATAAAGCAAATGACAGTGGACAAACTTATTAGGAAGAACAAAGAACATGGTAGAATTAAAGCTGCTGTTCAATCAATCAAGGAAGAGCTAGAAGATGAGAGGAGGCTATGGCAGCATTCAGAAAACCTGCACCGGAAGCTGGCTAGGGAGCTTTCTGAAGTGAAGTCTTCCTTCTCTGGTTGTTTGAGAAATcttgaaagagagagaaaagcaCGAATCCTTTTGGAGAATTTGTGTGATCAGTTTGCCAAAGGAATAAGAGATTATGAACAAGAGGTACATTCTCTTAGGCGGAGTTCTGAGAAGGGTCAGGGTCAGGTTAAAGGGAATAATAGCCTTGATAGGCTAATACTTCATATTTCAGAAGCTTGGCTTGATGAGCGCGTGCAGATGAAGCTAGCTCAATCTGACAGTGATCTTATAGAGAGAAATTCAATTGTTGACAAGTTAGGTTTTGATATTGAAACATTTCTTCATGCCAGACAATCtgttgatttgaaaaaatatggCTATTCCTCCCCAAAGGAGCTCAAGGAAATTCACCCTTGTCAGCATTCATTGGATTCCTTTCCACTAAAAGAGGCTGGAAGTGCACCTCAGAATATGGCTCAGGAAGATTCCATTGACACTGActattttgaaccaaaaagggcTGCTGGTGAAGGACTCCGCAAATTCAGCTCCAGATTGCAAGCAAACATGGACAGAAACACAtcatatgatgatgatgagagTTGTTTTGTGGAGAGGAAATCAAGTGAAGTGGGAGAAGACGGCACAGTTCTAAATGAAGAGGCCAAATATGATCCACAGGAAAGTTATAGAACCTGGATCCTGAGAATGAACTCAAGCCACAGGCCAGATACCCTGGTTGGAAATAGTTCCTTGTCATCAGAAGGTGATAAGGTTTATCCCGAGAGTATTTGCAAGGAAGACTCCCAGTCTGCAGTTACAGCTAATGGTAGTCCTGTAAAACTCTGGAAATCAAAGTTGACTGATTCAAATTTTGACAAGGCCGAGTCTTCTACCAAGTTGCCCAAAGGAGTAAAGGAAAACACATTGATGGCAAAACTCCTTGAAGCAAGATTAGAGGCACAGAAATCTCGCGCTAGAGCCACCAAAAGCACTTCTTGA 1923 0.4145 MERRGKVLEGEDKRGGLMVEKLRQGVLVGKKGGPSTPPPTWRLELPSQHNGSDRVQEFLNFPTSTLSARKLCSNIWEVLPHQHTPLPKMNKHGTTLRRRRRRRHRRSLHHHPKDTGSQVNNQLAEPPDTPSDSDQPASSASSSRRHVAASLVQHRRSVERNGCALQPVSPACYSSSVEVAPYKCAATPTSSIDFKGRIRESSYNLKTSTELLKVLNRIWSLEEQQASNLSVVKTLKTELDCSQARMKELLQEKQMNRQEMENLIKQMTVDKLIRKNKEHGRIKAAVQSIKEELEDERRLWQHSENLHRKLARELSEVKSSFSGCLRNLERERKARILLENLCDQFAKGIRDYEQEVHSLRRSSEKGQGQVKGNNSLDRLILHISEAWLDERVQMKLAQSDSDLIERNSIVDKLGFDIETFLHARQSVDLKKYGYSSPKELKEIHPCQHSLDSFPLKEAGSAPQNMAQEDSIDTDYFEPKRAAGEGLRKFSSRLQANMDRNTSYDDDESCFVERKSSEVGEDGTVLNEEAKYDPQESYRTWILRMNSSHRPDTLVGNSSLSSEGDKVYPESICKEDSQSAVTANGSPVKLWKSKLTDSNFDKAESSTKLPKGVKENTLMAKLLEARLEAQKSRARATKSTS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2884 640 MobiDBLite consensus disorder prediction 92 111 - -
Ssu4g2884 640 PANTHER INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1-RELATED 5 638 - -
Ssu4g2884 640 Coils Coil 232 270 - -
Ssu4g2884 640 PANTHER GB|AAF24581.1 5 638 IPR043424 -
Ssu4g2884 640 MobiDBLite consensus disorder prediction 114 148 - -
Ssu4g2884 640 MobiDBLite consensus disorder prediction 83 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2884 Ssu-Chr4 73666249 73670468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2884 - - gmx:100805864 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2884 4 73666249 73670468 Ssu4g2884 4 73666249 73670468 ECH
Ssu4g0172 4 2839284 2843016 Ssu4g2884 4 73666249 73670468 PCT