Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2876 ATGGAGTTGGAGCGCCCAACCGCGACGCCGCTCAACTCCGCCATGACCTTCGACGAAGCCTCCATGGAGCGCAGCAAGAGCTTCGTCAACGCCCTGCAGGAACTTAAGAACCTGAGGCCTCAACTTTATTCTGCTGCAGAATACTGTGAAAAATCTTATCTCCATAGTGAACAGAAACAAATGGTACTTGACAACCTGAAAGATTATGCTGTAAGAGCTCTTGTGAATGCTGTTGATCATCTAGGAACTGTTGCATACAAGTTAACTGACCTTCTCGAGCAGCAAACATTGGATGTCTCAACTATGGATTTGAAGGTTGCTTCCCTGAATCAgCAGAAACTGCTTACATGCCAAATTTACACCGATAAAGAAGGTCTACGGCAGCAGCAATTGTTGGCTTTCATTCCCAGACATCATAAGCACTACATTTTGCCAAATTCTGTCAATAAAAAGGTACATTTCAGTCCACACATACAGATTGATGCAAGACAGAATCCATTTCAAACCAGAACCCATTTTCAATCTACAGGTACCCCTGCGGCAAAAACTCTTTCATGGCATTTAGCATCAGAGACAAAGTCTACCTTAAAAGGGTCAGCGCATGCTTCCCCAAACATTGAGAACCCAAAGTTTTCTGCCAAGGCCTCTGGAGTTTTCCATCTTTTAGATAATGAAGAGAACACGTGGATGAAATCCTCACCAGCACAAATTCACTTTCCAAATGGAGTTCCTGCTTCTAGTACACCCATGCATACTTTGGGTGGTACACGCAAGGATGCATTGGAGGGTTCCAAACCATTGACAGCATTCAGGTCATTTGACAACCCAAATCGGCGTGAGACTGTCCAAATCCCTACTCGAAGCAAAAGTGTGCTATCAGCTTTCTTTGCCAAACAGAAAACACCAAAGTTGAGGGCCGGTTCTTTCTCATGA 933 0.4437 MELERPTATPLNSAMTFDEASMERSKSFVNALQELKNLRPQLYSAAEYCEKSYLHSEQKQMVLDNLKDYAVRALVNAVDHLGTVAYKLTDLLEQQTLDVSTMDLKVASLNQQKLLTCQIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSPHIQIDARQNPFQTRTHFQSTGTPAAKTLSWHLASETKSTLKGSAHASPNIENPKFSAKASGVFHLLDNEENTWMKSSPAQIHFPNGVPASSTPMHTLGGTRKDALEGSKPLTAFRSFDNPNRRETVQIPTRSKSVLSAFFAKQKTPKLRAGSFS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2876 310 PANTHER ABL INTERACTOR FAMILY MEMBER 12 309 IPR028457 -
Ssu4g2876 310 PANTHER BNAC03G72740D PROTEIN 12 309 - -
Ssu4g2876 310 Gene3D - 17 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2876 Ssu-Chr4 73493847 73500395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2876 - - gmx:100778182 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2876 4 73493847 73500395 Ssu4g2876 4 73493847 73500395 ECH
Ssu4g0178 4 2915521 2917713 Ssu4g2876 4 73493847 73500395 PCT