Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0178 ATGGAGCATCGCGCCATGACATTCGACGAGGTTTCCATGGAGCATGGCAAGAGCTTCATCTTCGCCTTGCAGGAACTTAAGAACCTGAGGCCTCAACTCTATTCTGCTGCGGAGTACTGTGAGAAATCTTATCTCCATAGTgatcaaaaacatatGGTACTTGACAACCTGAAAGATTATGCTGTAAGAGCCCTTGTTAATACTGTTGATCACCTAGGAACTGTGGCTTTCAAGTTATGTGACCTTCTTGAACAGCAAACATTTGATGTCTCAACCATGGACTTGAAGGTCTCTACGTTGAATCAgAAACTTCTTACATGCCATATTTACACTGATAAAGAAGGTCTTCGGCAACAGCAGTTGTTGGCTTTCATTCCTAGACATCATAAACACTACATTTTGCCAAATTCTGTCAATAAAAAGGTACATTTCAGCTCACACAGACAGATTGATGCAAGACAAAATCCATTTCAAACCAGAACTCGTCTTCCTTCTTCAGGTACCCCTATTTCAAGAACTCTTTCATGGCATTTAGCATCAGAAACCAAGTCTACCTTAAAAAAACAGACTTCACTGCACTTCAAAAAACGCCAAGGACTCAAAATTTTCTGCCAAGACCTCCGGAGTTTTCCACCTTTTAGATAG 645 0.4031 MEHRAMTFDEVSMEHGKSFIFALQELKNLRPQLYSAAEYCEKSYLHSDQKHMVLDNLKDYAVRALVNTVDHLGTVAFKLCDLLEQQTFDVSTMDLKVSTLNQKLLTCHIYTDKEGLRQQQLLAFIPRHHKHYILPNSVNKKVHFSSHRQIDARQNPFQTRTRLPSSGTPISRTLSWHLASETKSTLKKQTSLHFKKRQGLKIFCQDLRSFPPFR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0178 214 Gene3D - 8 109 - -
Ssu4g0178 214 PANTHER ABL INTERACTOR FAMILY MEMBER 4 191 IPR028457 -
Ssu4g0178 214 PANTHER ABI FAMILY-RELATED 4 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0178 Ssu-Chr4 2915521 2917713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0178 - - gmx:100779192 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0178 4 2915521 2917713 Ssu4g0178 4 2915521 2917713 ECH
Ssu4g0178 4 2915521 2917713 Ssu4g2876 4 73493847 73500395 PCT