Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2869 ATGTGGGGCACCATTGCCAATTTGAAGGAGAACCTGAACAAGATCGCTCTCGATGTTCACGACGAAGATGACGACGACGAAATTCTCCGCGTGTACGGCACCGGAAGCCCTGCCAACGGCGACATCTCCGCCGTCTCCGATCGCCGGAGTTCCCATGGCTCCGCCCATTCCAAATCGGGGATTAGGTCGCCGCTCGCAAACGGCGTCGAACATGCCTCTCTTTCTGAGATAGAACAATACAAAGCAGAAATCAAGAAACTTCAAGCTTCCGAGGCAGAAATTAAAGCATTGTCAGTTAATTATGCAGCtctgttaaaagaaaaagagGATCAGatcgttaaattaaataaaaaaaatggctcACTAAAGCAGAATTTGGAGGCTACAAATGCTGCTCTGCATGTCTCCAGAATTGAAGCTTCTGGAGCATCTACAAATGGCACTTATACAGTCAAGGGAAGTAGTGAACAATCACCCAATCGACAGCATAAGTTCAACATGCAACGGAAAAATCGGTATGCTGTAAACAATGGAACTGTGTCTTCTTTGGAATCTGATGCTATTCAAAGTGAGATGGAATTCAAACATTCAAATTTACAAGGAAATTATAAGGAGCTTGCAGATTTGGTTGATGGAAATACCACAGTAGCTGTACAGCATTCCCCAGATATACAAAAGTTGAAGTTAGAACTAGAGCAAGAACGTGATCGATTGGTGACCATTCGACTAAAATTCCaagAGGAACAGAGAATGAATAAGTCTTTCCGGGAGGAccttaatatattaaagttggAAAGAGACAAAACATCGAAGGAGATGAACAAAATGCGTACTGAATTGAATGAGAAAGTATCAGAAATAAAGCATCTGCAATTTGAGTTAACAAGAAGGGAAAATGAAGCAGGGGAGGCTGCTGATACCTTAAAAAGACGTATCAAAAACTTAGAGAAGGAAAATACCACTCTTAAGATGGAAAAGAATGAGATTGAGGCTGCTCTCGAAAATAGCAGGAAGTCTTTCACTGATAAAATGATGCCTGATGCTTCACATATTCAGAAAAAGGATTCAAGCAGTGTCGGTGATATGCCAGATCACTCCAAAAGTTTTCCAGGAAAGGAAGAAATGGAGAGATCCTTACAAAAGCTAAGTAAAGATTTGAAGGAAACACAGCGGGACAGGGATAAAGCAGTACAAGAATTGAACCGCCTCAAACAGCATTTACTGGAGAAGGAATCTGAAGAATCAGAAAAAATGGATGAAGACAGCAAAATCATCGAAGAGCTACGTGATAGCAATAATTATTTAAGCGCTCAAGTATCACATCTTGAGAGAACACTGAAGCAAGCACTTGCAAGTCAAGAGGAACTGAAGATGGCAAACAACAGTGAAATTCTCAAATCTAGAGAAACCATTACTGACCTGAACAAGAAGCTTACAAACTGTATGAGCACTATAGATGCTAAAAATGTTGAGCTTGTAAATCTACAGACAGCTCTAGGACAGTACTATGCTGAAATTGAAGCCAAGGTACAAAAAACATGTCactgttttttctttattattcataaattaacgGACAATAGTTGGGTTGTTAACACCtgctctctttcatttttttgttacagtttcttcttacatttttatatcaatatttttgaaGTCTATGTGTGCTTGTGTCTATAG 1683 0.3749 MWGTIANLKENLNKIALDVHDEDDDDEILRVYGTGSPANGDISAVSDRRSSHGSAHSKSGIRSPLANGVEHASLSEIEQYKAEIKKLQASEAEIKALSVNYAALLKEKEDQIVKLNKKNGSLKQNLEATNAALHVSRIEASGASTNGTYTVKGSSEQSPNRQHKFNMQRKNRYAVNNGTVSSLESDAIQSEMEFKHSNLQGNYKELADLVDGNTTVAVQHSPDIQKLKLELEQERDRLVTIRLKFQEEQRMNKSFREDLNILKLERDKTSKEMNKMRTELNEKVSEIKHLQFELTRRENEAGEAADTLKRRIKNLEKENTTLKMEKNEIEAALENSRKSFTDKMMPDASHIQKKDSSSVGDMPDHSKSFPGKEEMERSLQKLSKDLKETQRDRDKAVQELNRLKQHLLEKESEESEKMDEDSKIIEELRDSNNYLSAQVSHLERTLKQALASQEELKMANNSEILKSRETITDLNKKLTNCMSTIDAKNVELVNLQTALGQYYAEIEAKVQKTCHCFFFIIHKLTDNSWVVNTCSLSFFCYSFFLHFYINIFEVYVCLCL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2869 560 Coils Coil 425 445 - -
Ssu4g2869 560 MobiDBLite consensus disorder prediction 40 66 - -
Ssu4g2869 560 Coils Coil 298 335 - -
Ssu4g2869 560 Coils Coil 252 293 - -
Ssu4g2869 560 Coils Coil 224 244 - -
Ssu4g2869 560 MobiDBLite consensus disorder prediction 339 393 - -
Ssu4g2869 560 MobiDBLite consensus disorder prediction 40 61 - -
Ssu4g2869 560 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 510 - -
Ssu4g2869 560 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 510 - -
Ssu4g2869 560 Coils Coil 77 132 - -
Ssu4g2869 560 MobiDBLite consensus disorder prediction 357 393 - -
Ssu4g2869 560 Coils Coil 372 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2869 Ssu-Chr4 73427240 73435694 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2869 - - gmx:100808518 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2869 4 73427240 73435694 Ssu4g2869 4 73427240 73435694 ECH
Ssu4g2869 4 73427240 73435694 Ssu3g0667 3 15952461 15965208 PCT