Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0667 ATGTGGGGCACAATTGCCAACTTGAAGGAGAACTTGAACAAGATTGCCCTCGACGTTCACTACGCCGACGACGATGAAGACGACGTCGTTTTCCCTGCCGACGTCGATAACGCCGCCGTCTCCGATCGCCGCAATTCTCACAGCTTCGCACATTCCATATCGCTTCCTAGGTCGCCGGCGGCGGCGAACGGAATATCAGATCACCCATATGCTTCTGAGATAGAACAATATAAAGCAGAAATCAAGAGACTTCAAGCATCCGAGGCAGAAATTAAAGCACTATCTGTTAATTATGCAGCtctattaaaagaaaaagagGATCAGATTGTTAGATTGAATAAAGAAAATGGCTCattaaaacagaatttggagGCTACAAGTCCAGCATCTGCAAATGGCACTTACACAGTCAAGGGAAGTAGTGACCAATCATCGAATCGACAGCATAGGTTCACAACTCAAATGAAAAATCGTTATGCTACAAGCAATGGAACCACATCTGCTTTGGAATCTGATGCTATTCAAAGTAAGATGGTATCTAAACATTCAAACTTACAAGAAAAGGACAAGGAGCTAGCAGATGTGGTAGAGGGAAAAAGTAGCCCGACAGCAGCAGTACAACATACTCATGAGATACGAAAAATGAAGTTGGAACTAGAGCAAGAACGCAAAAAATTGGCAAATATTCAGCTAAAATTCCAGGAGGAAGAGAAATTGAACAAGTCTTTCCAGGAGGAGCTTAAATTGTTAAAGTTGGAAAGAGACAAAACAACAAATGAGATGAGCAAATTACACAATGAATTGAATGAGAAAATATCAGAAATGAAACGTCTGCAATTGGAGTTGACTAGACGGGAAGATGAAGAAGCAGTTGATGCTGTGGATAACTTCAAAAGACTAATTGAAACTTTAGAGAAGGAAAACACTACTCTTAAGTTGGAAAAGGATGAACTTGAGGCTGCACTCAAATCAAGTAGGACGTCTGGTAAAATGTCACCTGATGCTTCTCAGATTCAGAGCAAGGTTCCAAGCAGTAATAGTGATTTATCAGATCCTTCCAAAGGTTTCCCAGGGAAAGAAGACTTGGAAAGATCCTTACATAAGCTAAGTAAAGAATTGAAGGAAACACAAAAGGAGAGGGACAAAGCAGTACAAGAATTGACCCGTCTTAAACAGCATTTGCTTGAAAAGGAATCTGAAGAGTCAGAAAAAATGGATGAGGATAGCAAGATCATTGAAGAACTACGTGATAGCAATAATTATTTAAGGGCTCAAATATCACATCTTGAGAGAACTCTGAAACAGGCAACTGCAAGCCAGGAGAAACTGAAGATGGCAAATGACAATGAAATTCTAAAGTCCAGGGAAATCATTGATGACTTGAACAAGAAACTTACAAACTGTATGAGCATAATAGATGCTAAGAACACTGAACTTTTAAATCTTCAGACAGCTCTTGGACAATATTATGCTGAAATTGAAGCTAagGAACATTTAGAAGGAGATTTGGCTCGTGCAAAGGAAGAAACATCTAAGCTTTATCAACTGTTGAAAGATGCAGATTGCAGAGCAGATTTATTGATCAGTGAAAAGGAAGAAATTTTAGCCAAGCTTTCACAATCTGAGAAGGTACAATCAGAATGGAGAAGTAGAGTAAGCAAGCTTGAAGAAGACAATTCCAGATTGAGGCGAGCTCTTGAACAGAGTATGACACGGCTAAATAGAATGTCAGTGGATTCTGATTTTCTTGTTGACAGgCGCATTGTGATAAAATTACTTGTAACTTATTTCCAGAGAAACCACAGCAAAGAGGTTTTGGATCTAATGGTTCGCATGCTGGGATTCTCTAATGAGGACAAACAAAGAATAGGTGTTGCTCAACAAGGTCCAGGAAAAGGTGTTGTCCGCGGTGTTCTTGGGTTGCCTGGCCGCCTAGTTGGAGGTATCTTGGGAGGAAGTGGTTCAACTGAATCAGCTGCAAATGTAGGAGCAGATAACCAGTCCTTTGCAGATCTGTGGGTTGATTTTCTTCTCAAGGaaacagaagaaagagagaaaagggaatCGGCAGGAAGTACAGATAAAGCCATGGATGATTCACATGATAAAAGTCCTAATACTAATTCTTCTTCTCCACCACATTCCAATCAGAGGTTTAGCACTGGAACAGCATCAATTAACTCATCCACTAATCAATACATCAGTTCTCTCCCTCGTGGATACTTTCAGCATTCCGAACAAATTGGTTCCGAGTTCTCAACAGTCCCCCTTACATCATCAGATAGCAAAACTACTAGTTCAAAAGTTCTTCCTAGATactaa 2322 0.3932 MWGTIANLKENLNKIALDVHYADDDEDDVVFPADVDNAAVSDRRNSHSFAHSISLPRSPAAANGISDHPYASEIEQYKAEIKRLQASEAEIKALSVNYAALLKEKEDQIVRLNKENGSLKQNLEATSPASANGTYTVKGSSDQSSNRQHRFTTQMKNRYATSNGTTSALESDAIQSKMVSKHSNLQEKDKELADVVEGKSSPTAAVQHTHEIRKMKLELEQERKKLANIQLKFQEEEKLNKSFQEELKLLKLERDKTTNEMSKLHNELNEKISEMKRLQLELTRREDEEAVDAVDNFKRLIETLEKENTTLKLEKDELEAALKSSRTSGKMSPDASQIQSKVPSSNSDLSDPSKGFPGKEDLERSLHKLSKELKETQKERDKAVQELTRLKQHLLEKESEESEKMDEDSKIIEELRDSNNYLRAQISHLERTLKQATASQEKLKMANDNEILKSREIIDDLNKKLTNCMSIIDAKNTELLNLQTALGQYYAEIEAKEHLEGDLARAKEETSKLYQLLKDADCRADLLISEKEEILAKLSQSEKVQSEWRSRVSKLEEDNSRLRRALEQSMTRLNRMSVDSDFLVDRRIVIKLLVTYFQRNHSKEVLDLMVRMLGFSNEDKQRIGVAQQGPGKGVVRGVLGLPGRLVGGILGGSGSTESAANVGADNQSFADLWVDFLLKETEEREKRESAGSTDKAMDDSHDKSPNTNSSSPPHSNQRFSTGTASINSSTNQYISSLPRGYFQHSEQIGSEFSTVPLTSSDSKTTSSKVLPRY 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0667 773 Coils Coil 74 122 - -
Ssu3g0667 773 PANTHER MYOSIN HEAVY CHAIN - RELATED 1 773 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 120 168 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 750 773 - -
Ssu3g0667 773 Coils Coil 545 572 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 325 352 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 703 730 - -
Ssu3g0667 773 Coils Coil 205 324 - -
Ssu3g0667 773 Coils Coil 412 449 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 322 362 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 683 730 - -
Ssu3g0667 773 Coils Coil 359 400 - -
Ssu3g0667 773 MobiDBLite consensus disorder prediction 683 702 - -
Ssu3g0667 773 PANTHER VESICLE TETHERING-LIKE PROTEIN, PUTATIVE-RELATED 1 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0667 Ssu-Chr3 15952461 15965208 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0667 - - gmx:100794919 1194.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0667 3 15952461 15965208 Ssu3g0667 3 15952461 15965208 ECH
Ssu4g2869 4 73427240 73435694 Ssu3g0667 3 15952461 15965208 PCT