Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2843 atgaagAAGTTTGTACTCAAGCTAGATTTGCATGACGACAAGGATAAGCAGAAAGCCTTGAAAACAGTTTCAACTCTTTCAGGAATTGATGCCATCTCCATGGACATGAAAGGGAAGAAATTAACAGTGATAGGAACAGTAGATCCGGTAAGTGTGGTGAGCAAATTGCGCAAATACTGGCAGACAGACATAGTAGCAGTAGGACCAGTGAAGGAGCCTGAGAAGAAAGAGGACTCCAAGAAAGCAGAAGGCAAGAAGGAGGGAGGAAAGAAAGAGGATCAAAAGAAGGAAGAGGGCAAGaaggaagaaggaaagaaagaagagaagaaggaggatgAGAAGAAGAAGGAGCCACCCCCAGATCCTGTTTTGGAATGGTCCAGAGCTTATAGGGCATATAACCCCTACATGACCACACAATACTATGCTCCGAGCATGGAAGAGAACCCCAATGCCTGTGTCATTTGTTAA 471 0.4076 MKKFVLKLDLHDDKDKQKALKTVSTLSGIDAISMDMKGKKLTVIGTVDPVSVVSKLRKYWQTDIVAVGPVKEPEKKEDSKKAEGKKEGGKKEDQKKEEGKKEEGKKEEKKEDEKKKEPPPDPVLEWSRAYRAYNPYMTTQYYAPSMEENPNACVIC 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2843 156 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 156 - -
Ssu4g2843 156 MobiDBLite consensus disorder prediction 69 122 - -
Ssu4g2843 156 SUPERFAMILY HMA, heavy metal-associated domain 1 58 IPR036163 GO:0046872
Ssu4g2843 156 MobiDBLite consensus disorder prediction 67 127 - -
Ssu4g2843 156 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Ssu4g2843 156 Gene3D - 1 72 - -
Ssu4g2843 156 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2843 Ssu-Chr4 72720716 72722574 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2843 - - gmx:100499838 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2843 4 72720716 72722574 Ssu4g2843 4 72720716 72722574 ECH
Ssu3g0678 3 16286734 16288608 Ssu4g2843 4 72720716 72722574 PCT