Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0678 atgaagAAGTTTGTACTCAAGTTAGATTTGCCAGATAACAAGGCCAAGCAGAAGGCCCTGAAAACGGTCTCAACACTTTCAGGGATTGATGCCATCTCTATGGACATGAAGGACAAGAAATTAACAGTTATAGGAACCGTTGATCCGGTGAATGTGGTGAGCAAACTTCGCAAGTACTGGCAGACAGACATAGTCTCAGTAGGCCCAGCAAAGGAGCCTGAGAAGAAAGAGGAGCCAAAGAAGGAAGAGCCCAAGAAGGAGGAGCCAAAGAAGGAGGAAGGCAAAAAggaagaggagaaaaaggaagagcctaagaaagaagagaagaaggatgagaagaaagaagaggagaagaagCAGCCCAGCCCCAGCCCACCCCAGACCCAGTTTTAG 393 0.3919 MKKFVLKLDLPDNKAKQKALKTVSTLSGIDAISMDMKDKKLTVIGTVDPVNVVSKLRKYWQTDIVSVGPAKEPEKKEEPKKEEPKKEEPKKEEGKKEEEKKEEPKKEEKKDEKKEEEKKQPSPSPPQTQF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0678 130 Coils Coil 96 116 - -
Ssu3g0678 130 Gene3D - 1 72 - -
Ssu3g0678 130 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 114 - -
Ssu3g0678 130 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 114 - -
Ssu3g0678 130 MobiDBLite consensus disorder prediction 69 121 - -
Ssu3g0678 130 MobiDBLite consensus disorder prediction 62 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0678 Ssu-Chr3 16286734 16288608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0678 - - gmx:100305540 134.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0678 3 16286734 16288608 Ssu3g0678 3 16286734 16288608 ECH
Ssu3g0678 3 16286734 16288608 Ssu4g2843 4 72720716 72722574 PCT