Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2801 ATGACTATGAGTGGCTTAATTTCAAACCGCAACTTCGGTTCCTTCGTTCCCTCAGGAAATGTATATAGATTGGGGAAGGATATATCGGTTCCAAGAGGGGGGATTTCTATTTATGGTGCATCTGTTGCTAAGGATCCTTTTCCAAGATGGCAGCATAAGATGTATTTGCCTTTGGAAGACGGAGTTTCAAAACCAATGCAAACATCTCCCAACAAAGGGGATCATTGTTCTCTTGTATCCTGGCAGTCCAGTCAGTGCTTGAACTTTAAACTGAAGGCTCGCAGAAGAAGTCATTGTTCCTTCCTTTGTTCAGCTCCTTATGGCAGTAACAGTGTTGAACATAGGGAAGTATATGGACTTGGTTTGAGCAAAAGAAAGCATGCACAAACTGAGGGTGGTAAAGCAAATAAGTTCCGTGTTTGTTACAAGTCTGAGGAGTATGACATTTTGGAGACAAAGATAGATCCATTGCAATCAACTGAAGGGACTGGGGAAGCCATTCTCCTGGAAGGAAATCTGCAGCAAGTATCACCTTGGTGGCAGCAGTTTCCTAAGCGCTGGGTTATTGTACTGCTGTGTTTTACAGCTTTTTTGCTGTGTAACATGGATCGTgtAAATATGAGCATAGCAATACTTCCAATGTCACAAGAATTCAACTGGAACAGCGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGTTATCTACTTACTCAGATCGTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTAGTTCTCGGTTTTGGAGTTGTCTGGTGGTCAATTGCAACAGTTTTAACACCTATTGCTGCAAGACTTGGGTTGCCATGTCTGCTTATTATGCGTGCCTTTATGGGAATTGGTGAGGGTGTTGCAATGCCTGCAATGAATAATATACTTTCCAAATGGATTCCAGTATCAGAGAGAAGCAGATCACTTGCACTAGTATATAGTGGCATGTACCTTGGTTCTGTCACAGGCTTGGCATTCTCACCTGCGCTAATCCAGAAATTTGGGTGGCCATCGGTGTTTTACTCATTTGGATCCCTTGGAAGTATCTGGTTTGCTTTATGGTTGAGTAAAGCATATAGCTCACCAAAAGAAGACCCGGATCTTGGGGCGGAAGAGAAGAAGGTCATACTTGGAGGCAACGTATCAAAAGAACCTGTATCAGTTATTccttggaaattaattttatcaaaagcaCCTGTTTGGGCTTTAATAATCTCTCACTTCTGCCACAATTGGGGGACATTTATTCTATTAACTTGGATGCCTACGTACTACAATCAGGTTCTGAAGTTCAATCTCACTGAATCTGGGCTATTTTGTGTCCTGCCATGGTTAACCATGGCTGTTTTTGCAAATATAGGAGGCTGGATTGCTGATACACTTGTGAGCAAAGGCCTTTCAATAACATCTGTTCGAAAGATTATGCAATCAATCGGGTTTCTGGGTCCTGCATTTTTTCTTACACAGCTAAGCCATGTGAGAACACCCGCCATGGCAGTACTTTGCATGGCTTGCAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTGTATTCCAATCACCAAGACATTGGACCACGCTATGCTGGAGTATTGCTGGGACTATCAAATACTGCAGGAGTGCTTGCTGGTGTCTTCGGTACAGCTGCAACTGGATACATACTCCAACGTGGTTCTTGGGATGATGTATTTAAGGTTGCTGTTGCATTGTACATAATTGGCACATTGGTCTGGAATATCTTTTCAACTGGAGAGAAAGTTCTTGACTGA 1791 0.4249 MTMSGLISNRNFGSFVPSGNVYRLGKDISVPRGGISIYGASVAKDPFPRWQHKMYLPLEDGVSKPMQTSPNKGDHCSLVSWQSSQCLNFKLKARRRSHCSFLCSAPYGSNSVEHREVYGLGLSKRKHAQTEGGKANKFRVCYKSEEYDILETKIDPLQSTEGTGEAILLEGNLQQVSPWWQQFPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEFNWNSATVGLIQSSFFWGYLLTQIVGGIWADKLGGKLVLGFGVVWWSIATVLTPIAARLGLPCLLIMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLALVYSGMYLGSVTGLAFSPALIQKFGWPSVFYSFGSLGSIWFALWLSKAYSSPKEDPDLGAEEKKVILGGNVSKEPVSVIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVFANIGGWIADTLVSKGLSITSVRKIMQSIGFLGPAFFLTQLSHVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYIIGTLVWNIFSTGEKVLD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2801 596 Pfam Major Facilitator Superfamily 193 554 IPR011701 GO:0022857|GO:0055085
Ssu4g2801 596 CDD MFS_SLC17A9_like 190 589 IPR044777 -
Ssu4g2801 596 ProSiteProfiles Major facilitator superfamily (MFS) profile. 189 593 IPR020846 GO:0022857
Ssu4g2801 596 SUPERFAMILY MFS general substrate transporter 176 588 IPR036259 -
Ssu4g2801 596 Gene3D MFS general substrate transporter like domains 184 373 IPR036259 -
Ssu4g2801 596 PANTHER SOLUTE CARRIER FAMILY 17 80 596 - -
Ssu4g2801 596 Gene3D MFS general substrate transporter like domains 394 594 IPR036259 -
Ssu4g2801 596 PANTHER ASCORBATE TRANSPORTER, CHLOROPLASTIC 80 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2801 Ssu-Chr4 71453533 71460390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2801 1 596 Organic Solute Cotransporters AT4G00370 73.869 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2801 K08193 - gmx:100793618 1118.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2801 4 71453533 71460390 Ssu4g2801 4 71453533 71460390 ECH
Ssu3g0714 3 17233366 17239500 Ssu4g2801 4 71453533 71460390 PCT