Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0714 ATGGCTCTGGGTGGCTTGGTTTCCAACAGAAACTTCACTTCATTCATTGGACCAGGAAATGTATATCAATTGGGAAAGGATCTATCACCTCAAAGAGGGGGCATTTCTTGTGTATTTGTTGCACGTTATGGTGGTCAGATTGCAAAGGATCCTTTCTCAAGATGCTGGCATGGGATGTGTTTTTATACTAAAGAACCTTTGAATGAGAAAGTTTCAACACCAATACCAACATTTCATGGTGAAGTGCAGCACTGTTCTCCACTATCCCAGAAATCCATTCACTGCATGAACATGAAACTTAAGGCCAACAGAAGATGTCAATGCTACCTCTCTTCAGATCCCTATAGCCGTAGCCTTATTCAACAAAGACCAGTGTATGGACTAGGTTTAAACAAACTTGGTAAGGTGAATACAGCTTGTGTTCATTACAAGTCTGAGGAGGATGATATTACGGAAACAAAGGTGGATCCTCTGGCATCAACTGAAGGTACAGGTAAAGTCATTCTCCTGGAAGGAAATGTTCCACAAGTATCTTCTTGGTGGCAGCAGTTTCCTAAGCGCTGGGTTATTGTATTGCTATGTTTTGCAGCATTTCTGCTGTGCAACATGGACCGTGTGAATATGAGCATAGCAATACTTCCAATGTCACAAGAGTTTAAGTGGAACAGTGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGATCCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGCTTGTGCTAGGTTTTGGAGTTGTCTGGTGGTCAATGGCAACAGTTTTAACACCTATTGCTGCAAAAATTGGGCTCCCTTGTTTGCTTATTATGCGTGCCTTTATGGGGATTGGTGAGGGTGTTGCCATGCCTGCCATGAATAATATGCTTTCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTTGCCCTAGTATATAGTGGCATGTACCTTGGTTCTGTGGTTGGCTTGGCATTCTCACCTGTGCTAATCCAAAATTTTGGGTGGCCATCAGTGTTTTACTCTTTTGGATCCCTTGGAAGTATCTGGTTTGTCTTGTGGTTGAGAAAGGCATATAGCTCACCAAAAGATGACCCTGATCTTGGGGTAGAGGAGAAAAGGCTCATACTGGAAGGCAATGTATCAAATGCACCTGTTTCTAACATTccttggaaattaattttatcaaaagcaCCTGTCTGGGCTCTTATAATCTCCCACTTCTGTCACAATTGGGGgacatttattcttttaaccTGGATGCCTACTTACTATATTCAGGTTCTGAAGTTCAACCTCACCGAATCTGGGCTTTTATGTGTTCTTCCATGGTTAACCATGGCTGCTTTTGCAAATATTGGTGGGTGGATTGCTGACACACTAGTGAGAAAAGGCTTCTCCATAACAGTTGTTCGAAAGATCATGCAATCAATCGGGTTTCTGGGTCCTGCCTTTTTTCTTACGCAGCTGAGCCATGTCAAAACACCTGCCATGGCTGTACTGTGCATGGCATGTAGTCAGGGATCTGATGCATTTTCACAATCTGGTCTGTATTCCAATCACCAAGACATTGGACCACGCTATGCTGGTGTATTGCTTGGACTATCGAATACTGCAGGAGTGCTTGCTGGTGTCTTTGGTACCGCTGCAACTGGATTCATACTCCAGCGAGGTTCTTGGAATGATGTTTTTAAGGTTGCTGTTGCATTGTACATAATTGGCACATTGGTGTGGAACATCTTTTCAACTGGGGAGAAAGTTATTGACTGA 1794 0.4242 MALGGLVSNRNFTSFIGPGNVYQLGKDLSPQRGGISCVFVARYGGQIAKDPFSRCWHGMCFYTKEPLNEKVSTPIPTFHGEVQHCSPLSQKSIHCMNMKLKANRRCQCYLSSDPYSRSLIQQRPVYGLGLNKLGKVNTACVHYKSEEDDITETKVDPLASTEGTGKVILLEGNVPQVSSWWQQFPKRWVIVLLCFAAFLLCNMDRVNMSIAILPMSQEFKWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKLVLGFGVVWWSMATVLTPIAAKIGLPCLLIMRAFMGIGEGVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVVGLAFSPVLIQNFGWPSVFYSFGSLGSIWFVLWLRKAYSSPKDDPDLGVEEKRLILEGNVSNAPVSNIPWKLILSKAPVWALIISHFCHNWGTFILLTWMPTYYIQVLKFNLTESGLLCVLPWLTMAAFANIGGWIADTLVRKGFSITVVRKIMQSIGFLGPAFFLTQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGFILQRGSWNDVFKVAVALYIIGTLVWNIFSTGEKVID 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0714 597 PANTHER ANION TRANSPORTER 4 24 597 - -
Ssu3g0714 597 Gene3D MFS general substrate transporter like domains 185 374 IPR036259 -
Ssu3g0714 597 SUPERFAMILY MFS general substrate transporter 177 589 IPR036259 -
Ssu3g0714 597 PANTHER SOLUTE CARRIER FAMILY 17 24 597 - -
Ssu3g0714 597 ProSiteProfiles Major facilitator superfamily (MFS) profile. 190 594 IPR020846 GO:0022857
Ssu3g0714 597 Gene3D MFS general substrate transporter like domains 394 595 IPR036259 -
Ssu3g0714 597 CDD MFS_SLC17A9_like 191 590 IPR044777 -
Ssu3g0714 597 Pfam Major Facilitator Superfamily 194 555 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0714 Ssu-Chr3 17233366 17239500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0714 1 597 Organic Solute Cotransporters AT4G00370 70.569 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0714 K08193 - gmx:100784401 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0714 3 17233366 17239500 Ssu3g0714 3 17233366 17239500 ECH
Ssu3g0714 3 17233366 17239500 Ssu4g2801 4 71453533 71460390 PCT