Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2785 ATGTCTAAGTCTGAATATGTTGTTGAGCTTCCTATTTTAGACATTTCTCAGCCATTACAGCCATcttctctaacctctctctctaAAGCCTGCAAAGATTGGGGATTTTTCCACATAATCAATCATGGAATCTCCAAAGATCTTTGCAGCCAGATCCATTATTTATCCAAATACCTCTTCAGCCTCCCTTCTGAGGCTAAACTTAAACTTGGTCCTTTCTCCTCTATAAAGTCTTACACCCCTCACTTCATTGCTTCTCCATTCTTTGAGAGCCTCAGAATTAATGGACCAAACTTCTACGTTTCTGCCAAGAGTTCTGAAGACATCCTCTTTGAAAAACAGAATTCCAAATTCAGTGAGACGCTGCAAGAATATTGTAGTAAGATGGCAGATTTGTCTGAGAAAATTCTAAAGCTTGTGTTGATGAGCTTAGAGGATGGCTTTGAGAAGCTGTTTTATGATTCTGAATTCAATAAGTGCCATGGTTACTTAAGGATAAACAACTATTCTGCTCCAGAAAGTTTGGAGGATCAAGTTGAGGGGCTTGGAATGCACACTGATATGAGTTGTATTACTATCTTATACCAAGATGAAATAGGAGGGCTTCAAGTGAGATCACATGAGGGCAAGTGGATAGACATAAGCCCTTCTGAGGGGACCCTAGTGGTGAACATAGGGGACATGATGCAAGCTTGGAGCAATGATAAATTAAGGTCTTCTGAACATAGAGTTGTTTTGAAGCAGCCTGTGAACAGGTTTTCCTTGGCTTTCTTTTGGTGCTTTGAGGATGAGAAGGTGGTCATGGCACCTGGTGAAGTTGTTGGGGGAGGGAACAAGAGGATGTACCATCCATTCGTGTGCTCAGAATACTTGAAATTCAGAGAGAACAATCAAAGAGGAAGGTTTGAAAAAGTGGGTGAAATAGAACTAAACACTTTCGTTGGTGTTGTTGATAGCGTTCGAAAATCGTTCATCGGGTACAATTGGGCGAGGTTGTTTTGGGGGTTTCCTCATCCTTTTGAAGGATTTGTGACACGCATATTCGATCTAAACGTGAGGTACTAA 1065 0.4019 MSKSEYVVELPILDISQPLQPSSLTSLSKACKDWGFFHIINHGISKDLCSQIHYLSKYLFSLPSEAKLKLGPFSSIKSYTPHFIASPFFESLRINGPNFYVSAKSSEDILFEKQNSKFSETLQEYCSKMADLSEKILKLVLMSLEDGFEKLFYDSEFNKCHGYLRINNYSAPESLEDQVEGLGMHTDMSCITILYQDEIGGLQVRSHEGKWIDISPSEGTLVVNIGDMMQAWSNDKLRSSEHRVVLKQPVNRFSLAFFWCFEDEKVVMAPGEVVGGGNKRMYHPFVCSEYLKFRENNQRGRFEKVGEIELNTFVGVVDSVRKSFIGYNWARLFWGFPHPFEGFVTRIFDLNVRY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2785 354 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 311 - -
Ssu4g2785 354 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Ssu4g2785 354 Pfam 2OG-Fe(II) oxygenase superfamily 165 258 IPR044861 -
Ssu4g2785 354 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 311 - -
Ssu4g2785 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 156 262 IPR005123 -
Ssu4g2785 354 Gene3D - 2 293 IPR027443 -
Ssu4g2785 354 SUPERFAMILY Clavaminate synthase-like 7 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2785 Ssu-Chr4 70916645 70923165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2785 8 290 Glycosyltransferase AT5G59530 29.730 2.23e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2785 - - gmx:100782766 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0723 3 17453962 17455048 Ssu4g2785 4 70916645 70923165 PCT