Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0723 ATGTCTAAACTCAAATCTTATGCTAACATTCCCATTTTAGACCTTTCTCAGCCATTGCAGCCATCTTCTCTATCTTCTCTCTATAAAGCAAGCAAAGATTGGGGGTTTTTCCACATAATCAACCATGGAATCTCCAAAGATCTTTGCAGCCAGCTCCAGTCACTATCCAATCACCTCTTCGGCCTCCCTTCTCATACTAAACTTAGACTTGGTCCTTTCTCATCTTTAAAATCTTACACCCCTTATTTCATTGCCTCTCCATTCTTTGAGAGCCTTCGAGTTAATGGACCCAACTTCTATGTTTCTGCTAATAGTTCTGCTGAAATCCTCTTTGACAAAAAGGACTCCAAATTCAGTTTGATAATACAAGAATATTGCAGTAAGATGGAAGAATTGTCTAAGAGAATTCTAAAGCTTGTGTTGATGGGGATAGGGGATGTTATTGAGAGGAAGTTCTACGATTCTGAGTTCAAGAAGTGCCACGGCTACTTGAGGATAAACAATTACTCAGCCCAAGAAATTATGGAAGATCAAGTTGAGGGGCTTGGGATGCATACTGATATGAGTTGTATTACTATCTTATATCAAGATGAGATAGGAGGGCTTCAAGTGAGATCACATGAGGGAGAGTGGATAGATATATGCCCTTCTGAGGGCACCCTAGTGGTGAACATAGGGGATATGTTGCAAGCTTGGAGCAATGACAAACTAAGGTCCTCAGAACATAGAGTTGTTTTGAAGCATCATGTGAACCGGTTTTCTCTAGCATTCTTTTGGTGCTTTGAGGATGACAAGGTGATTTTGGCACCAGATGAAGTTGTTGGAGAAGGAAACAAGAGGGAGTACAAACCATTTGTGTGCTTGGACTATTTGAAATTTAGAGAGAACAATGAAAGAGGTAGATTTGATAAGGTGGGTTTCACAGTAAAAGATTTTGCTGGGATCAAGGCTCAACTGTAA 960 0.4021 MSKLKSYANIPILDLSQPLQPSSLSSLYKASKDWGFFHIINHGISKDLCSQLQSLSNHLFGLPSHTKLRLGPFSSLKSYTPYFIASPFFESLRVNGPNFYVSANSSAEILFDKKDSKFSLIIQEYCSKMEELSKRILKLVLMGIGDVIERKFYDSEFKKCHGYLRINNYSAQEIMEDQVEGLGMHTDMSCITILYQDEIGGLQVRSHEGEWIDICPSEGTLVVNIGDMLQAWSNDKLRSSEHRVVLKHHVNRFSLAFFWCFEDDKVILAPDEVVGEGNKREYKPFVCLDYLKFRENNERGRFDKVGFTVKDFAGIKAQL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0723 319 Pfam 2OG-Fe(II) oxygenase superfamily 165 259 IPR044861 -
Ssu3g0723 319 SUPERFAMILY Clavaminate synthase-like 6 297 - -
Ssu3g0723 319 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 3 312 - -
Ssu3g0723 319 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 77 IPR026992 -
Ssu3g0723 319 Gene3D - 2 293 IPR027443 -
Ssu3g0723 319 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 262 IPR005123 -
Ssu3g0723 319 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0723 Ssu-Chr3 17453962 17455048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0723 10 290 Glycosyltransferase AT5G59530 27.891 8.61e-22 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0723 - - gmx:100812108 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0723 3 17453962 17455048 Ssu3g0723 3 17453962 17455048 ECH
Ssu3g0723 3 17453962 17455048 Ssu4g2785 4 70916645 70923165 PCT