Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2760 ATGGCAGAGCTCCAAACCAAGGCTGAACCCGGTTCGGTTCCGGTTCCGGCTCCGGTGGAGCCCGAGCCGCCGCTGGCTGAGGCGCCGTCGCTTGACGCCGTTGAGAAGAAAGCGGCGGCGGCGCCACCGCCTGCTCCGGCAGCGGCAGAGGAAACCAAAGCTCTTGCTGTTGTGGAGAATGAGAAGACATCAGATCCTGTAAAAAAGAAGGCCACAGGTGGATCTCTCGATAGAGATATTGCTCTTgcagaaatagagaaagagaaaaggttGTCTAATGTGAAGGCATgggaagaaagtgaaaaatCCAAAGCAGAGAATAAAGCCCAAAAGCAGCTCTCTGCTGTTGCTGCTTGGGAAAACAGCAAGAAAGCAGCTCTTGAAGCTCAGCTGAGAAAAATTGAGGAACAActagagaaaaagaaagcagaatatggtgaaaaaatgaaaaacaagataGCCTTAATTCACAAGCAAGCAGAGGAGAAGAAGGCAATGGTTGAGGCCAAGCGTGGTGAAGAAATTCTCAAGGCTGAGGAGACGGCTGCGAAATACCGGGCAACTGGAAACACTCCAAAGAAGGCCTTTGGATGCTTttaa 600 0.45 MAELQTKAEPGSVPVPAPVEPEPPLAEAPSLDAVEKKAAAAPPPAPAAAEETKALAVVENEKTSDPVKKKATGGSLDRDIALAEIEKEKRLSNVKAWEESEKSKAENKAQKQLSAVAAWENSKKAALEAQLRKIEEQLEKKKAEYGEKMKNKIALIHKQAEEKKAMVEAKRGEEILKAEETAAKYRATGNTPKKAFGCF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2760 199 MobiDBLite consensus disorder prediction 55 78 - -
Ssu4g2760 199 MobiDBLite consensus disorder prediction 1 78 - -
Ssu4g2760 199 PANTHER OS02G0117200 PROTEIN 19 199 - -
Ssu4g2760 199 Pfam Remorin, C-terminal region 89 194 IPR005516 -
Ssu4g2760 199 Pfam Remorin, N-terminal region 32 85 IPR005518 -
Ssu4g2760 199 Coils Coil 117 151 - -
Ssu4g2760 199 PANTHER CARBOXY-TERMINAL REGION REMORIN 19 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2760 Ssu-Chr4 70555136 70559834 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2760 - - gmx:100802984 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0760 3 18234574 18239319 Ssu4g2760 4 70555136 70559834 PCT