Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2743 ATGTACATAAATGACAATCATAACAGGCTTGCAAAAAGGTGTACATCACAATTCAGAGTTGAAACTGAAGATGGGAGAAGCTACAGAAAGATTATGCTCCTTGCTTCTTGTATGCTGATAACATTTGAAAAGTTGTACAACGCAGGGATTAGTGGAGTGGTAATTGAAGACTCTGATTTAGTCGCTGCAGTCCTCATGAATCGTGGGGCAGTACCAGAAGAAGATGGGACAAAGGCAATGACTCAGACATATGAGTTAGCTGAAGAATGCTTGCAAATAAATTACTATGGCGCTAAAATAACTGTAGAATCACTTATGCCCCTCCTCCAATTATCTGATTCACCTAGAGTTGTGAATGTATCATCCTCCCTGGGGCAGTTAGAGCTCTAA 390 0.4051 MYINDNHNRLAKRCTSQFRVETEDGRSYRKIMLLASCMLITFEKLYNAGISGVVIEDSDLVAAVLMNRGAVPEEDGTKAMTQTYELAEECLQINYYGAKITVESLMPLLQLSDSPRVVNVSSSLGQLEL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2743 129 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 46 128 - -
Ssu4g2743 129 Gene3D - 45 129 - -
Ssu4g2743 129 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 46 128 - -
Ssu4g2743 129 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 78 126 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2743 Ssu-Chr4 70181382 70183731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2743 K15095 - gmx:100807079 135.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2743 4 70181382 70183731 Ssu4g2743 4 70181382 70183731 ECH
Ssu4g2743 4 70181382 70183731 Ssu3g0770 3 18359768 18362847 PCT