Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2738 ATGTCTTCTTTTGTTGCTCTTCATGGCCTGCATGGCTCTCTTCTCCGATCCCAGTTCCTAGGCCAAGATACCCTCACTCATCTTCACCCTCGCAACAACGCTTCCACCATTCACACCAAAACAACAATAGCACAACCATGTGCCAAATTTGACATGCTGCAAATCTTGGGAGGAAGAGGACTATGCAATGGAGAAGAAGGCCTTAAACAAGAGCTGAAGAGGCAAGCTGGTGTTGATGAGAAGGCACCACCACTAGCAGCAAGTGACAATGAGCAAGAGGACCCAGCAACACTGGCCTTGGCAAGTGTTGCAGAAGATGGTTTTGAGAAGGAACTGATGGGGCTAACTGGGGGGTTTCCAGGGGGTGAGAAGGGGTTGAAAAAGTTCATTCAGGAAAACCCTCCTCCCAAACCAAGTGCAGGGGGCAAAAGCCTGAAACTGGCACTGTCAAAGAAGCCAAAACCACCAGAACTGCCTCTGTTGCTGCCAGGGATGATTGCCATTGTGAAGAACCCAAATAACCCATTTTACATGTACTGTGGGATTGTGCAAAGAATCACAGATGGAAAGGCAGGGGTTCTCTTTGAAGGAGGGAACTGGGATAAGTTGATCACGTTTAGGTTGGAAGAACTTGAGCGCAGAGAAAAAGGCCCTCCCGGTAAGAACCCCAGAGTCACTGGAAAGAGTTTGCCCATTTCAGAACACGTTTTATTTGAAGCAGCCACCAAACAAAACTTGCCTATGAAACTGAAGAGGGCTGGGCCTAAAACATTTGAGCTAAAGAATTTTGCATTACTTGTTGGAGACAAATCTTGGGCCCCAGATCCAGAAATTGACTTTAGCTGA 846 0.474 MSSFVALHGLHGSLLRSQFLGQDTLTHLHPRNNASTIHTKTTIAQPCAKFDMLQILGGRGLCNGEEGLKQELKRQAGVDEKAPPLAASDNEQEDPATLALASVAEDGFEKELMGLTGGFPGGEKGLKKFIQENPPPKPSAGGKSLKLALSKKPKPPELPLLLPGMIAIVKNPNNPFYMYCGIVQRITDGKAGVLFEGGNWDKLITFRLEELERREKGPPGKNPRVTGKSLPISEHVLFEAATKQNLPMKLKRAGPKTFELKNFALLVGDKSWAPDPEIDFS 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2738 281 Pfam NAD(P)H dehydrogenase subunit S 161 212 IPR021659 GO:0009767
Ssu4g2738 281 Gene3D - 156 225 - -
Ssu4g2738 281 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 225 IPR021659 GO:0009767
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2738 Ssu-Chr4 70064200 70065546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2738 K00345 - gmx:100527145 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0773 3 18406722 18407198 Ssu4g2738 4 70064200 70065546 PCT