Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0773 ATGGCTACTTTTCCCTCTCTTCATGGCCTGCACAACCCTCTTCCTCGATCCCAATTCCTAGGCCACGATCATCCCCTCACTCATCACTTCCCTCTCAAACAACCACCTTCGACAGTGCATCACAAAACACCAACAACTCATGAAGTTCTAAAGCTACGTGCCAAGTTCAACATATTGGAACTCCTGGGAGGGAGAGGACTGTGCAACGGGGAAAAGGGTCTTCAACAAGAGCTGGAAAGGCAAGTGGTTGTTGATGACCAGCCTCAGCCACCATCATCACCAGCAGAAGCAGCATCAAGTGGCAAAGAGGAAGAAGGCTCGGGTAGTGAAGGAAGTGTTAAGGTTCCAGAAGATGGTTTTGAGAAAGAGATGATGGGGCTAACTGGGGGGTTTCCTGGGGGTGAGAAAGGGTTGCAAAAGTTCATTGAGAAAAACACTCCTCCAAAACCAGCTAATGTTGTGACCATGTCATTTTGA 477 0.4843 MATFPSLHGLHNPLPRSQFLGHDHPLTHHFPLKQPPSTVHHKTPTTHEVLKLRAKFNILELLGGRGLCNGEKGLQQELERQVVVDDQPQPPSSPAEAASSGKEEEGSGSEGSVKVPEDGFEKEMMGLTGGFPGGEKGLQKFIEKNTPPKPANVVTMSF 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0773 158 MobiDBLite consensus disorder prediction 107 121 - -
Ssu3g0773 158 MobiDBLite consensus disorder prediction 81 158 - -
Ssu3g0773 158 MobiDBLite consensus disorder prediction 1 46 - -
Ssu3g0773 158 PANTHER NADH DEHYDROGENASE-LIKE COMPLEX, SUBUNIT S-RELATED 1 150 - -
Ssu3g0773 158 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 150 IPR021659 GO:0009767
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0773 Ssu-Chr3 18406722 18407198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0773 K00345 - gmx:100776479 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0773 3 18406722 18407198 Ssu4g2738 4 70064200 70065546 PCT