Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2718 ATGGGTGCTAGTTTTTCGTCTTGTGTTTGTGACGAGGATGGTAACCCTCTGAGGCCAAGGCTTGGGGATATACCCGAGAGCTGTGTGGCATTGGTGTTAATGTGTTTGGACCCACCGGATATTTGCAAGCTTGCACGGTTGAACAGGGCGTTTCGTGATGCTTCGTTAGCGGATTTCATTTGGGAGTCGAAGCTGCCTTTGAATTATAAGTTCATCGTGGAGAGAGCTTTGAAGGATGCTTCTGTGGCAGAGCTGGGGAAGAGGGATATCTACGCAAGACTCTGCAGGCCTAGTTTGTTTGACAACGGGACCAAGGAAATTTGGCTAGATAAGAGGACCGGTGGGGTGTGTTTGACGATTTCCTCCCAAGCGTTGAGGATTACAGGGATAGATGATCGGAGATATTGGAGCCGCATTTCGACCGAAGAGTCAAGATTCCACACAGTCGCTTATCTTCAACAAATTTGGTGGCTTGAAGTGGAAGGAGATGTTGATTTTCAATTTCCACCTGGGAGATACAATGTGTTCTTTAGACTCCAGCTTGGCAGGTCATCCAAGAGATTGGGTCGTCGAGTTTGTAAGACTGAGGACATTCATGGCTGGGATATAAAACCTGTAAAATTTCAGCTAACAACTTCTGATGGTCAGCATGCTGTATCCCAGAGTCATTTGGATAATCCAGGGCATTGGGTTCTCTACCATGCCGGAAACTTTGTTTCTAAGGATCCTAATGGTCTGATGAAGATCAAGTTTTCATTGACTCAAATTGATTGCACGCATACCAAAGGTGGTTTGTGTTTGGATTCTGTTTATATATGCAATAGTGATGTAAAGAATGAGGTGTAG 846 0.4515 MGASFSSCVCDEDGNPLRPRLGDIPESCVALVLMCLDPPDICKLARLNRAFRDASLADFIWESKLPLNYKFIVERALKDASVAELGKRDIYARLCRPSLFDNGTKEIWLDKRTGGVCLTISSQALRITGIDDRRYWSRISTEESRFHTVAYLQQIWWLEVEGDVDFQFPPGRYNVFFRLQLGRSSKRLGRRVCKTEDIHGWDIKPVKFQLTTSDGQHAVSQSHLDNPGHWVLYHAGNFVSKDPNGLMKIKFSLTQIDCTHTKGGLCLDSVYICNSDVKNEV 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2718 281 PANTHER F-BOX PROTEIN PP2-A13 1 281 - -
Ssu4g2718 281 Pfam Phloem protein 2 116 273 IPR025886 -
Ssu4g2718 281 PANTHER F-BOX PROTEIN PP2-A15 1 281 - -
Ssu4g2718 281 SUPERFAMILY F-box domain 18 76 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2718 Ssu-Chr4 69559378 69561661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2718 - - gmx:100789493 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2718 4 69559378 69561661 Ssu4g2718 4 69559378 69561661 ECH
Ssu6g1516 6 24849360 24851688 Ssu4g2718 4 69559378 69561661 ECH