Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2675 ATGGCGCCGAGGCGAGGCAAGGGATCGCGTTTCCCCGTTCTCGCTTTCGTTCTCCTCTGCTTTCTTGCGCCGGTGGTTTTCTTCCTCGCTCGGGGGCTCTACGCTGCGGATCAAGATTATATTTCAGCTGTTCCAAGTAAACAGGTTAGCAAATGGAGAGAATGGCAGGCATTGCAGGACCTTAAATCACTTTTTTCGGAAGAGgttcTTGATGTTATTGTATCCAGCACAAATGATATGGGGCCTTTCAGTCTTGACAATTTCAGAAAAAATTTGTCTGCTTCATGGAGAGTTGTTGGATTAGAAACTTCAAACACTAAATTTGAGctaaacCAACCAACAATTAGACAAGAAAAGGCAAAGATGAAGGAAGGCAGATCTTCAGATGGTCTTGCTGAGTGGACTGATAGTCCCGCACAGCAAACCCGAAGGCATTTAATAGAGAAAAGGAGGGAAAAGCGTGCTGCTGAATTGGTAAAACTGGATAATGAAGTAACTGTAAAGCTAGAAAATGCAGCTATTGAACGCTCAAAATCTGTTGAGTCAGCCGTTCTAGGTAAATACAGCATTTGGAGGAAAGAAATTGAGAATGAAAATGGTGATTCTACTGTTCGGTTGATGCGGGACCAGATCATTATGGCTAGGGTATATTTAAGCATTGCAAAGATGAAGAACAAGGTCGAACTGTACCAAGAACTAAATTCCCGGATCAAAGACAGTCAACATGCTTTAGGTGATACAATTTCTGATGCGGATCTACAGCACAGTGCACATGAGAAAATAAAGGCTATGGGTCAAGTTCTGTCAAAAGCAAGAGAGCTATTGTATGACTGCAAGTTGGTCACTGGAAAACTAAGAGCAATGCTACAGACAGCTGATGAGCAAGTTAGGAGTTTGAAGAAACAGAGCACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCATTGCTTATCTATGCGCCTTACCATAGATTACTTCCTCCTTCCTCCTGAAAAGAGAAAGTTCCCTAGGAGTGAGAATTTGGAGAATCCCAGTCTTTATCACTATGCACTGTTTTCGGACAATGTCTTGGCTGCATCCGTTGTTGTCAACTCAACTATTACGAATGCAAAGGATCCTTGGAAGCATGTTTTTCACCTTGTTACTgataaactaaattttggaGCCATGAACATGTGGTTTCTTTTGAACCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGATTTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGCGGCAGCTTGAATCTGCTACAATGAAAGAGTATTATTTCAAGGCAGGCCATCCAAACTCACTTTCTTCCGGTGCTTCCAATCTGAAGTATAGAAATCCAAAATATCTCTCAATGCTCAACCACCTGAGATTCTATCTTCCACAGGTTTATCCTAAATTGGATAAAATCCTATTTCTTGATGATGACATTGTTGTTCAGAAGGATTTGACTGGATTATGGGCTGTGGATCTTAATGGGAAAGTAAATGGTGCAGTAGAAACTTGTGGTGAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCTAGAAATTTTGATCCAAATTCTTGTGGTTGGGCATACGGGAtgaacatatttgatttgaaggAGTGGAAAAGGAAGGATATCACTGGCATATATCACAAGTGGCAGAATATGAATGAAGACAGGGTGCTGTGGAAGCTAGGGACATTACCTCCAGGGCTAATGACATTCTATGGGCTGACACATCCTCTAGATAAATCATGGCATGTACTTGGTTTGGGTTACAATCCAAGTGTGGATCGATCAGAAATTGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCATGGTTAGAAATTGCCATGACAAAGTATCGGTCTTTCTGGACCAAATATGTCAAGTACAATCATCCCTATCTTCGGAACTGTAAGTTAAATGAATAG 1989 0.4057 MAPRRGKGSRFPVLAFVLLCFLAPVVFFLARGLYAADQDYISAVPSKQVSKWREWQALQDLKSLFSEEVLDVIVSSTNDMGPFSLDNFRKNLSASWRVVGLETSNTKFELNQPTIRQEKAKMKEGRSSDGLAEWTDSPAQQTRRHLIEKRREKRAAELVKLDNEVTVKLENAAIERSKSVESAVLGKYSIWRKEIENENGDSTVRLMRDQIIMARVYLSIAKMKNKVELYQELNSRIKDSQHALGDTISDADLQHSAHEKIKAMGQVLSKARELLYDCKLVTGKLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYFLLPPEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSTITNAKDPWKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVENVDDFKWLNSSYCPVLRQLESATMKEYYFKAGHPNSLSSGASNLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVDLNGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNSCGWAYGMNIFDLKEWKRKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLDKSWHVLGLGYNPSVDRSEIENAAVVHYNGNMKPWLEIAMTKYRSFWTKYVKYNHPYLRNCKLNE 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2675 662 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 5 662 IPR029993 GO:0047262
Ssu4g2675 662 MobiDBLite consensus disorder prediction 119 138 - -
Ssu4g2675 662 Pfam Glycosyl transferase family 8 320 636 IPR002495 GO:0016757
Ssu4g2675 662 CDD GT8_like_1 351 649 - -
Ssu4g2675 662 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 353 656 IPR029044 -
Ssu4g2675 662 SUPERFAMILY Nucleotide-diphospho-sugar transferases 351 659 IPR029044 -
Ssu4g2675 662 PANTHER HEXOSYLTRANSFERASE 5 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2675 Ssu-Chr4 68018621 68033723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2675 6 662 Glycosyltransferase AT3G61130 73.979 0.0 1022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2675 K13648 - gmx:100811181 1195.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0851 3 20772302 20776807 Ssu4g2675 4 68018621 68033723 PCT