Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0851 ATGGCGCCCAACAACAGAACCAAGGGATCCCATTTCCCCCTTCTCGTTTTCCTCCTCCTCGCGcccctcctcttcttcttcttcttcgcgTCGCCCCTCCACACTCTTCCCGATCAAGATGATAATTCAGCTGTTACGGGTGAAAAGGTTGCCAGATTGAGAGAATGGCAGGCATTGCAAGAtcttaaatcacttttttcGAAAGAGGTTCTTGATGTTATTGTGTCCAACACAAATGATGTGGGGCCTTTGAGTCTTGAGAGTTTCAGAAAAAATAATCTGTCTGCTTCATGGAGAGTTGTTGGATTAAAGGCTTCAAATGTTACGAATCAGCTAAACCAACGGGCAAGCAATGTTGGACAAGAGAAGCAAAATGGGAAGGAAGACAGATTTTCAGTTGGTCGTGCTCAGTGGACTGACAGTCCTGCACAGCTAACCAGAAGGAAATTAATagagaaaaggaaggaaaaacgTGCTGCTGAGTTGGTAAAACGGGATGATGAAGTAATTGTAAGACTTGAAGATTCAGCTATTGAACACTCAAAATCTGTTGATTCGGCAGTTCTAGGTAAATACAACATTtggaggaaagaaaatgagaatgaaaatgTTGATTCTACAGTAAGGTTGATGCGAGACCAAATCATTATGGCTAAGGTTTACTTGAGTATTGCAAAGATGAAGAACAAGCTTCAACTGTACCAAGAACTACAATCTCAGCTTAAAGAAAGTCAACGTGCTTTAGGTGAGGCAACTTCTGATACCGACCTACATCACAGTGATCatgaaaaaatcaaaactatgGGCCAAGTTCTTTCTAAGGCAAAAGAACAATTTTATGACTGCAAGTTGGTTACTGGGAAATTGAGGGCAATGCTACAAACAGCTGATGAGCAGGTTAGGGGCTTGAAGAAACAAAGCACATTCCTTAGTCAGTTGGCTGCCAAGACCATACCAAATGGAATTCACTGCTTATCAATGCGCCTTACCATAGATTACTACCTCCTTCCtcttgaaaagagaaaattccCTAGAAGTGAGAATTTGGAGAATCCTAATCTCTATCATTATGCCCTATTCTCAGACAATGTCTTGGCTGCATCTGTTGTTGTCAACTCAACTATTGTGAATGCAAAGGATCCTTCAAAGCATGTGTTTCACCTTGTTACTGATAAACTAAACTTTGGAGCCATGAACATGTGGTTTTTGTTGAACCCTCCTGGAAAAGCAACAATCAATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCATCCTACTGCCCAGTCTTGAGGCAGCTTGAATCTGCTACAATGAAAGAGTATTACTTCAAGGCAGGCCATCCAACTACTACTGGTGCTTCTAGTCTCAAGTACAGAAATCCAAAATATCTGTCAATGCTCAACCACCTGAGATTCTATCTTCCACAAGTTTATCCAAAGTTGGATaagattctttttcttgatgATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGAATCTTCACGGAAAAGTAAATGGTGCTGTGGAAACATGCGGTGAGAGTTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCACATATTGCAAAAAATTTTGATCCAAATGCTTGTGGTTGGGCATATGGGATGAACATGTTTGATTTGAAGGAGTGGAAAAAGAAGGACATCACTGGCATATATCACAAGTGGCAGAATTTGAACGAAGACAGGGTGCTGTGGAAGCTAGGGACTTTACCTCCAGGGCTAATGACATTCTATGGCTTAACACATCCACTAAATAAATCATGGCATGTACTTGGTCTGGGTTACAATCCAAGTGTGGATCGTTCAGAGATTGATAATGCAGCAGTGATACACTACAATGGTAATATGAAACCATGGTTAGAGATAGCCATGACAAAGTATCGGTCTTACTGGACCAAATATGTCAAATTTAATCATCCCTATCTTCGGAATTGTAAGCTACATGAATGA 1995 0.3794 MAPNNRTKGSHFPLLVFLLLAPLLFFFFFASPLHTLPDQDDNSAVTGEKVARLREWQALQDLKSLFSKEVLDVIVSNTNDVGPLSLESFRKNNLSASWRVVGLKASNVTNQLNQRASNVGQEKQNGKEDRFSVGRAQWTDSPAQLTRRKLIEKRKEKRAAELVKRDDEVIVRLEDSAIEHSKSVDSAVLGKYNIWRKENENENVDSTVRLMRDQIIMAKVYLSIAKMKNKLQLYQELQSQLKESQRALGEATSDTDLHHSDHEKIKTMGQVLSKAKEQFYDCKLVTGKLRAMLQTADEQVRGLKKQSTFLSQLAAKTIPNGIHCLSMRLTIDYYLLPLEKRKFPRSENLENPNLYHYALFSDNVLAASVVVNSTIVNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATINVENVDEFKWLNSSYCPVLRQLESATMKEYYFKAGHPTTTGASSLKYRNPKYLSMLNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWAVNLHGKVNGAVETCGESFHRFDKYLNFSNPHIAKNFDPNACGWAYGMNMFDLKEWKKKDITGIYHKWQNLNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYNPSVDRSEIDNAAVIHYNGNMKPWLEIAMTKYRSYWTKYVKFNHPYLRNCKLHE 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0851 664 Coils Coil 224 254 - -
Ssu3g0851 664 PANTHER HEXOSYLTRANSFERASE 6 664 - -
Ssu3g0851 664 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 357 658 IPR029044 -
Ssu3g0851 664 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 6 664 IPR029993 GO:0047262
Ssu3g0851 664 SUPERFAMILY Nucleotide-diphospho-sugar transferases 355 660 IPR029044 -
Ssu3g0851 664 Pfam Glycosyl transferase family 8 324 638 IPR002495 GO:0016757
Ssu3g0851 664 CDD GT8_like_1 355 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0851 Ssu-Chr3 20772302 20776807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0851 14 664 Glycosyltransferase AT3G61130 74.540 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0851 K13648 - gmx:100798073 1203.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0851 3 20772302 20776807 Ssu4g2675 4 68018621 68033723 PCT