Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2647 ATGGCCGCCTCAGAACCTGCAAGTGCAGAGGGAGAGACTATGGCTGTGGATGCTGCCCCAAGGAAGCCCCGGATTCTACTTGCTGCTAGTGGGAGTGTTGCTGCTGTCAAATTTGCAAATCTCTGTCATTGTTTCTCTGAATGGGCAGACGTAAGAGCAGTGGCCACAGGTGCATCTTTGCATTTCATTGATAGAGCATCGATGCCCAAGGATGTAATTTTGTACACGGATGCAGATGAATGGTCTAGTTGGAAGAAACTTGGCGATAGCGTGCTTCACATTGAGCTTCGTAAATGGGCTGATATTATGGTCATCGCTCCATTATCAGCAAACACCCTTGGCAAGATTGCTGGAGGGTTGTGTGACAATCTACTGACGTGCATTGTGCGAGCCTGGGACTTCAGCAAGCCATTCTTTGTTGCACCAGCCATGAACACTTTTATGTGGAACAATCCTTTCACCGAGCGGCATCTCATCTCCATTGATGAGCTTGGCATTTCTCTAATCCCACCTGTTACAAAGAGGTTAGCTTGTGGGGATTATGGCAATGGTGCCATGGCTGAACCCTCTACCATTTACTCAACCGTAAGGCTCTTCTATGAGTCAAAGGCTCAGCAAGGTAATGGTGATATCTGA 636 0.478 MAASEPASAEGETMAVDAAPRKPRILLAASGSVAAVKFANLCHCFSEWADVRAVATGASLHFIDRASMPKDVILYTDADEWSSWKKLGDSVLHIELRKWADIMVIAPLSANTLGKIAGGLCDNLLTCIVRAWDFSKPFFVAPAMNTFMWNNPFTERHLISIDELGISLIPPVTKRLACGDYGNGAMAEPSTIYSTVRLFYESKAQQGNGDI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2647 211 PANTHER BNAA01G27100D PROTEIN 13 203 - -
Ssu4g2647 211 PANTHER HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY 13 203 - -
Ssu4g2647 211 Pfam Flavoprotein 24 197 IPR003382 GO:0003824
Ssu4g2647 211 SUPERFAMILY Homo-oligomeric flavin-containing Cys decarboxylases, HFCD 22 199 IPR036551 GO:0003824
Ssu4g2647 211 Gene3D - 22 210 IPR036551 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2647 Ssu-Chr4 67388051 67389232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2647 K01598 - gmx:100499989 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2647 4 67388051 67389232 Ssu3g0859 3 20870575 20871833 PCT