Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2519 atgaaattgcaACAACAACTAGGGAAGCAACAAGCAATGGACGAAGTGGCAAAGATTCGGAAGAGGTTTGGGGACGAGCAGAGCACCCTGTTGGACCAATTTGAGAGGCTGTCCTTTGAGTCTCACCTCAACAAAGCCATGCTGAAAAGGAGCCAATCAGAGCCGGGGTTGCCAAGGTCAGTGTCACAGCCGCGACACGTTAGTGTGACCCCAACAATACCTCTCTTGAACCAGAGGCGCTGTCGTGGGTCAGGGTTTCACAAGGTCCTGAAGAAATTGCTCAGACCCATTCTTGGCAGAAAGGGTAGTGGAGAAAGGAAAGAGGCCCCAGATCCTAAGAATCCACTCACTTGGAAGGCCTTCAGCAGATCACTAAGGGACAAAAACATAGTATTTATGTATATCCGTCAAATGTAG 417 0.482 MKLQQQLGKQQAMDEVAKIRKRFGDEQSTLLDQFERLSFESHLNKAMLKRSQSEPGLPRSVSQPRHVSVTPTIPLLNQRRCRGSGFHKVLKKLLRPILGRKGSGERKEAPDPKNPLTWKAFSRSLRDKNIVFMYIRQM 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2519 138 MobiDBLite consensus disorder prediction 47 71 - -
Ssu4g2519 138 MobiDBLite consensus disorder prediction 55 71 - -
Ssu4g2519 138 PANTHER - 7 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2519 Ssu-Chr4 63525091 63529232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2519 - - pvu:PHAVU_010G070300g 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2519 4 63525091 63529232 Ssu4g2519 4 63525091 63529232 ECH
Ssu3g0952 3 22527517 22527888 Ssu4g2519 4 63525091 63529232 PCT