Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0952 ATGGCGGTTGCTGTCGGAACGAGGTTTGGGGACGAAGAGAGCACTCTATTGGACGAGTTTGAGAGGCTGTCGTTCGAGGCACACGCGGCGCAGCTCAACAGGGTCATGCTGGGGCGGAGTCTTTCGGAGCCAAAGTTGACAAAGTCACACTCGCGACTCATCAGCGTGGCTCCGATACCTCTGGTGACTCAGGTGCTGCAAGGGCCAGGGCCACGTCAGCATGGTCGCGGTGGTGGGTCAAGGTTTCACAGGGTGTTGAAGAAATTGCTGAAACCCATTCTTGGAAGGAAGAGAGGGGGGAGAAAACAAGTTGTCTCGGATGACAAGGATTTACTGTCTTTCAAGGCCTTCAGCAGATCACTGCGGTTCTGA 372 0.5511 MAVAVGTRFGDEESTLLDEFERLSFEAHAAQLNRVMLGRSLSEPKLTKSHSRLISVAPIPLVTQVLQGPGPRQHGRGGGSRFHRVLKKLLKPILGRKRGGRKQVVSDDKDLLSFKAFSRSLRF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0952 123 PANTHER - 5 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0952 Ssu-Chr3 22527517 22527888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0952 - K02230 mtr:MTR_4g028110 113.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0952 3 22527517 22527888 Ssu3g0952 3 22527517 22527888 ECH
Ssu3g0952 3 22527517 22527888 Ssu4g2519 4 63525091 63529232 PCT