Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2485 ATGCTTAATGCTAAAACCGAGGTACCCCAGAAGAGTACTGTCCTTCAAATCAAGCAAGATGACAAGTTCTTCCGCAGGCTACTTTCAAAGGAAAGTTCCATGTCCAAACCATCCTTCAGAATAGCACTTGCTGTGCCGTTTGTGTGGGAATCTGAGCCAGGCACCCCCAAGTACACATTCTCTGATGACACTCTCCCTCCTCTAACTCCTCCACCTTCTTATCATTTTAACACTATCAATGCctacaaaaagaaagagaagaagcgCTCAAAGTCCAATCTCTTGCTGACAATGCTACCGAAACTGAACCTCAAGAAAATGATTCTGTCATCCTCATACCCTTCATGGTCATCATCATCAAGCTCCTCCAAAGTTGTCCCTATGGCTAAGTTCGGCAAGAAGAAGCTCTTAAGCTATGGATCATCTAATGATAATGAAGGAGGTGGTGCTAGTTCACCCTCTTCCAAATTGTGCTTTAGCATTCCTCGTGCCACTAGTTCAGAAAGAGGGTTCTAA 516 0.4225 MLNAKTEVPQKSTVLQIKQDDKFFRRLLSKESSMSKPSFRIALAVPFVWESEPGTPKYTFSDDTLPPLTPPPSYHFNTINAYKKKEKKRSKSNLLLTMLPKLNLKKMILSSSYPSWSSSSSSSKVVPMAKFGKKKLLSYGSSNDNEGGGASSPSSKLCFSIPRATSSERGF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2485 171 MobiDBLite consensus disorder prediction 142 162 - -
Ssu4g2485 171 MobiDBLite consensus disorder prediction 142 171 - -
Ssu4g2485 171 PANTHER EXPRESSED PROTEIN 1 166 - -
Ssu4g2485 171 PANTHER OS05G0165500 PROTEIN 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2485 Ssu-Chr4 62512596 62513111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2485 - - ccaj:109814145 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0993 3 23298948 23299508 Ssu4g2485 4 62512596 62513111 PCT