Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0993 ATGTTCAGTGCCAAAGCTGAGCTTCCCCAAAAGACAGTGCTCCAAATCAAGCAAGATGACAAGTTCTTCTGCAGGCTTCTTTCAAAGGAGAGTTCCATGTCCAAGCCCTCTTTCAGAATGGCTGTTGCAGTCCCTTTTGTGTGGGAGTCTCAACCTGGCACCCCCAAATACACTTTCTCTGAGGACACTCTCCCTCCTCTCACTCCTCCACCTTCCTATTATGCTACTGCCACCAAAAACAAGCCACTGAAGAAAAGCTCAAGATTCAATCTCTTGTTAGCACTCTTCCCAAAACTAAATCTCAAGAAAACCATTCTCTCACCCTCCCCACCTTCCTCTCCATCTTCCCCATCACCCTCTCTATGGTCACCCTCAGACTCTTCCAAAGCTGTCCCAATGGGGAAGCTTGGAAGGAGGCGTTTTTTAAGCTATGGCTCATCTTTTGACTTTAGGGGAGATGATGAAGAAGAGGGTGCTAGGGCTACTTCACCCACTTCAACACTTTGCTTTGGCATTTCTCGTTCTACCAGCACTTTGGCTAATAGTGGCTTCCGAGGCTGA 561 0.4777 MFSAKAELPQKTVLQIKQDDKFFCRLLSKESSMSKPSFRMAVAVPFVWESQPGTPKYTFSEDTLPPLTPPPSYYATATKNKPLKKSSRFNLLLALFPKLNLKKTILSPSPPSSPSSPSPSLWSPSDSSKAVPMGKLGRRRFLSYGSSFDFRGDDEEEGARATSPTSTLCFGISRSTSTLANSGFRG 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0993 186 MobiDBLite consensus disorder prediction 149 168 - -
Ssu3g0993 186 MobiDBLite consensus disorder prediction 106 134 - -
Ssu3g0993 186 PANTHER EXPRESSED PROTEIN 1 176 - -
Ssu3g0993 186 PANTHER OS05G0165500 PROTEIN 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0993 Ssu-Chr3 23298948 23299508 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0993 - - gmx:100801292 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0993 3 23298948 23299508 Ssu3g0993 3 23298948 23299508 ECH
Ssu3g0993 3 23298948 23299508 Ssu4g2485 4 62512596 62513111 PCT