Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2450 ATGCCTCACGTAAGAGAAATTGTTGTGAAAAAAGAGCGTTACGGAATTGATTCCAATTCCAATTCAAATGGAAGATGCTCTGTTCCAGAGTATAACAAAAAGTTGGTCAGAAGTGCGGAGGCGTTAATTGAAGAGGAGCCACTGAAGCCATGGATCACTCTCAAGAGAAACGTGAAGAACATAAGGTACCTTTCTTCGATGGTTGATATAAGCTTTAAGAATAGCTATGTGTATGTTGATGTTGGAGCTAGAAGCTACGGTTCTAGTATTGGAAGTTGGTTTAGGAAACAGTACCCGAAACAGAACAAGACCTTTCACGTGTATGCAATTGAGGCTGATAAAGCGTTTCATCAGGAGTATGTGTTGAAAAAGGGGGTTACTCTGTTGCCTTATGCTGCGTGGGTGAGGAATGAGAGTTTGGTGTTTGAGATTAACCGTGACCCTGGGGAGAAGGTTCAGGGTAAGGGCAGGGGAATGGGGAGGATTCAGCCATTGCAGTCTTCGGGTGGTTTTGATGGTGGTGAGGTTGAGAAGATTCCGGGGTTTGATTTTGCTGAGTGGTTGAAGAACACGGTTTCGAAGAACGATTTTGTTGTGATGAAGATGGATGTGGAGGGTACCGAGTTTGATTTGATTCCCAGGTTGTTTGAAACTGGGGCTATCTGTTTGGTGGATGAGGTTTTTCTTGAGTGCCATTACAATAGGTGGCAGAGGTGTTGCCCTGGACAGAGGAGTCCCAAGTATGAGAAAACTTATGATCAGTGCTTGCAGCTCTTCACTTCTCTCAGACAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA 822 0.4416 MPHVREIVVKKERYGIDSNSNSNGRCSVPEYNKKLVRSAEALIEEEPLKPWITLKRNVKNIRYLSSMVDISFKNSYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKAFHQEYVLKKGVTLLPYAAWVRNESLVFEINRDPGEKVQGKGRGMGRIQPLQSSGGFDGGEVEKIPGFDFAEWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEVFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFTSLRQSGVLVHQWW 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2450 273 PANTHER METHYLTRANSFERASE DOMAIN PROTEIN 1 273 - -
Ssu4g2450 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 213 IPR029063 -
Ssu4g2450 273 PANTHER METHYLTRANSFERASE 1 273 - -
Ssu4g2450 273 Gene3D Vaccinia Virus protein VP39 60 236 IPR029063 -
Ssu4g2450 273 Pfam Methyltransferase FkbM domain 80 239 IPR006342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2450 Ssu-Chr4 61519402 61520223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2450 - - gmx:100811015 525.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2450 4 61519402 61520223 Ssu4g2450 4 61519402 61520223 ECH
Ssu3g1031 3 24175276 24176796 Ssu4g2450 4 61519402 61520223 PCT