Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2438 ATGCCTTGCCTTTACATCTCCACCAATATTAACTTAGATGGAGTTAACATCGATCCCATATTTTCTGAAGCCACCACTGCAGTCTCCACAATCATCGGCAAACCAGAGAAGTTTGTGATGGTCATATTGAAGGGGTCAGTGCCAATATCTTTTGAAGGTAACAAAGAACCAGCTGCATATGCTGAGATAGTTTCAATGGGTGGCATAAATTCAGAAGTGAAGAGGAAGCTAATTAATACCATTGGCACCATCTTGCAGTCTAATCTATCCATACCAAGAACAAGATTTTTTCTCAAAGTCTTTGACACAACGGTATTTCGTACTAAATCAAAAATGTAA 339 0.3864 MPCLYISTNINLDGVNIDPIFSEATTAVSTIIGKPEKFVMVILKGSVPISFEGNKEPAAYAEIVSMGGINSEVKRKLINTIGTILQSNLSIPRTRFFLKVFDTTVFRTKSKM 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2438 112 PANTHER MACROPHAGE MIGRATION INHIBITION FACTOR-LIKE PROTEIN 1 112 - -
Ssu4g2438 112 SUPERFAMILY Tautomerase/MIF 1 103 IPR014347 -
Ssu4g2438 112 Pfam Macrophage migration inhibitory factor (MIF) 2 103 IPR001398 -
Ssu4g2438 112 Gene3D Macrophage Migration Inhibitory Factor 2 107 IPR014347 -
Ssu4g2438 112 PANTHER D-DOPACHROME DECARBOXYLASE 1 112 IPR001398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2438 Ssu-Chr4 60995717 60998430 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2438 K07253 - gmx:100805338 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2438 4 60995717 60998430 Ssu4g2438 4 60995717 60998430 ECH
Ssu3g1041 3 24445366 24446545 Ssu4g2438 4 60995717 60998430 PCT