Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2370 ATGGTAGGACCAGTGAGGCCTCAATTTGTGTTGTTTGGTTCGTCCATAGTTGAGTTGAGTTATAGTGATGAAGGTTGGGGAGCTACTCTTGCCAACTTGTATGCTCGCAAGGCAGATGTAATTTTGCGAGGATACGCTGGTTGGAATTCAAGGCGTGCTCTGCAGGTTCTGGATATAATATTTCCCAAGGATGCCACTATTCAACCGTCACTGGTAATTGTGTACTTTGGTGGTAATGATTCTATGCATCCACATCCATCTGGCCATAGTCCTCATGTACCCCTCCAAGAATACATTGAAAATATGAGGAAGATTTCTATCCATCTTAAGAGCCTTTCAAAGAAGACTCGCATAATATTTCTCAGTTCCCCTCCCATCAATGAGGCACAAATGCATGAAACGCTCAGTAATCTACTGGGGCAATTAAGAAGGACTAATGAATCCTGTCGAATATACTCGGAAGCGTGTTTGGAGCTGTGCCGCGAGATGAATGTGAAGGCCATTGATCTCTGGTCTGCATTCCAGAAAAGGCATGACTGGTTAGATGTTTGCTTTACGGATGGAATTCATTTGTCATCTGAGGGGAGCAAGATAGTGGCAAAAGAGATATTGAAGGTCCTCAGAGAAGCAGACTGGGAACCTAGTCTGTACTGGAAGTCAATGCCAATTGAGTTTGCAGATGATTCTCCATTTGATCCTATTGGTGCAGATGAAAAGAGTACTATAAATGTCTCTAACGGGAACTTCCAGGGAAATCCTCAATTGgagtaa 771 0.4306 MVGPVRPQFVLFGSSIVELSYSDEGWGATLANLYARKADVILRGYAGWNSRRALQVLDIIFPKDATIQPSLVIVYFGGNDSMHPHPSGHSPHVPLQEYIENMRKISIHLKSLSKKTRIIFLSSPPINEAQMHETLSNLLGQLRRTNESCRIYSEACLELCREMNVKAIDLWSAFQKRHDWLDVCFTDGIHLSSEGSKIVAKEILKVLREADWEPSLYWKSMPIEFADDSPFDPIGADEKSTINVSNGNFQGNPQLE 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2370 256 Pfam GDSL-like Lipase/Acylhydrolase family 11 197 IPR013830 -
Ssu4g2370 256 Coils Coil 95 115 - -
Ssu4g2370 256 MobiDBLite consensus disorder prediction 239 256 - -
Ssu4g2370 256 SUPERFAMILY SGNH hydrolase 7 210 - -
Ssu4g2370 256 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 250 - -
Ssu4g2370 256 Gene3D SGNH hydrolase 6 235 IPR036514 -
Ssu4g2370 256 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 250 IPR045136 -
Ssu4g2370 256 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Ssu4g2370 256 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2370 Ssu-Chr4 57950272 57953366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2370 K23978 - gmx:100796512 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2370 4 57950272 57953366 Ssu4g2370 4 57950272 57953366 ECH
Ssu3g1117 3 26588364 26594567 Ssu4g2370 4 57950272 57953366 PCT