Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2369 ATGGGGGACTTCAACCTGGCGCTGGTGATCGTGGCCATCGTGGTGTGCGTCGTCGTGTTCCTCTTCAACGTGTACCTCCTCGTGAACTACCAGCACCCCGACGACGCCAACCAGGCCTACTTCCCCAAATTCGTCGTCGTTCTGGGGCTCTCCGTCGCCGCCATCTCCATCCTCATGCTCCCCGCCGACGTCGCCAACCGCCAGGCCTGCCGCCACGCGATCTACAACGGCGCGTGCAGCCTCACTCTCCCCATGAAGGACCTCTGGCTCGCCGTCTACATCCTCGACGCCGTGCTCGTCTTCTTCGTCATCCCCTTCGCCATGTTCTACTACGAAGGCGACCAAGACAAGAGTGTTGGGAAGCGGATTAAGAGCGCGTTGTTGTGGATGGTGACTACTGCGATTGTGTGCGCTCTTGTTTTGGGGATTTTGTATGGACTTATTGGGAAGGTGGACTTTACTGTTAGGCAtctctcttcttccacaagCTCATTTCCTAGCACATGGAACTTCAATAGTGGTCAACAATGTATTGGAAACACCCATCAGTGTTCTGCATACTCTTCTAGTCCTTCATCAGAGAAAACATGGACCATGCGTACTACCTTTCCAGAATATGTTGTTGCTCTTGCCACTATTGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCATTGGGACTTATGTTTTCATTCATTCGGCGTCCAAAGGCTGTCATCACTCGTTCACAGTATATCAAGGAAGCAACTGAACTTGGTAAAAAAGCAAAAGAACTGAAGAAAGCAGCTGAGTCACTTCATCAGGAAGAAAGAAGTGGTTCCAAGGGTAGGAAATTTCGTAAAAATGTGAAATCAGTAGAAAAGGAGTTGCTTCAATTAGAAGAAGATGTCAAGCTTCTTGAGGAGATGTATCCACAAGGGGAGAAGGCTGAGACAACATGGGCACTGACAGTTCTAGGGTACCTGGCAAAACTTGTTTTGGGAATTTTAGGGTTTATTGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAATTGATCCtcctctttctcctttcttgaATGAAGTTTTCATCAAGCTGGATGATATCTGGGGTCTTCTGGGTACAGCTGCATTTGCATTTTTCTGCTTCTACCTTCTCCTTGCCGTGATTGCTGGAGCCATGATGCTTGGGCTGAGACTAGTTTTCATTACTATACATCCCATGAAGTGGGGAGCGACTCTCATGAACTCTTTTCTGTTCAATGTGGGGCTTATCCTTCTTTGTTCCATTAGTGTGATCCAGTTCTGCTCCACAGCATTTGCGTACTATGCTCAAGCAACTGCAGCACAGGAAATATTTGGCCACACCCTGGAGTCTCTTCGtggaattaaatatttgtacaaGTACAACGTCTTTCAGATTGCATTTGTTGTATTGGCTGGATTGACATTTGTATATTATGCTGCCTTTGGGTGGAGAAGAAAGAAGCCTAGTGGCAGGTTCCAATTGTCTACATGA 1527 0.4551 MGDFNLALVIVAIVVCVVVFLFNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACSLTLPMKDLWLAVYILDAVLVFFVIPFAMFYYEGDQDKSVGKRIKSALLWMVTTAIVCALVLGILYGLIGKVDFTVRHLSSSTSSFPSTWNFNSGQQCIGNTHQCSAYSSSPSSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLMFSFIRRPKAVITRSQYIKEATELGKKAKELKKAAESLHQEERSGSKGRKFRKNVKSVEKELLQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKLVLGILGFIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2369 508 Coils Coil 282 309 - -
Ssu4g2369 508 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 507 - -
Ssu4g2369 508 Coils Coil 248 275 - -
Ssu4g2369 508 Pfam LMBR1-like membrane protein 9 486 IPR006876 -
Ssu4g2369 508 PANTHER BNAC05G43630D PROTEIN 1 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2369 Ssu-Chr4 57940961 57948319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2369 K14617 - gmx:100796998 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1123 3 26678304 26683553 Ssu4g2369 4 57940961 57948319 PCT