Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2342 ATGGCGGCGAAACAACCCGACTTTAGTTGGATGGTTCCTATCGAAGTGATGCTGGGTTCCCTCTACCACGGGCAAGTTCAAGCTTGCAGCATTTCGAGCGTCACAGACGAGCTTCGAGACCCAAACGAAGCAGCTTTCAAGCCAAAGGAGGTCTCCATCGGACCCTTACACAGAGGAATCACCAGGCACGTGCAGTTAATGGAAGAGACCAAATGGCGTTACATGCGCGAGTTCCTCGACAAAAGAGGAACGCAGGAGCAAAACGGAAGATCAATGCAAAGGCTCAGAAACTGCGGCACCGACATCCTCAAGTTGGATAAAATAATCATCGCAAGTTACGGTGGTAACATCGAATCGGAACCGCAAGAGCTAGCTAAAATAATGATAGTAGACGGTTGCTTTTTGTTGGAGCTTCTTATCAGACTTGGCGATTTTATAGGTAACAACCACAATAGCAACGGTAGGGGTTATGCCAACGACCCCATACTAAAAAACGAGGAGAAGCTCGTGTCTGTTCTGAACGATGTCACAATGCTCGAGAACCAAATTCCCTTCATCGTTCTCAAGAAGATATATAGGAAGGTCTCACCCGATGGCAGTGACATCGACAATGATCACCGGGTTGCTAATATTGTTCGCAATGCCTTCGGTTACCCTGTGCCTGAGACTGCTACTGACAAGGTTGAGATGAACTTTGTTGCTTTCAATGTTAGCAGGAAATGTAGATGA 729 0.4705 MAAKQPDFSWMVPIEVMLGSLYHGQVQACSISSVTDELRDPNEAAFKPKEVSIGPLHRGITRHVQLMEETKWRYMREFLDKRGTQEQNGRSMQRLRNCGTDILKLDKIIIASYGGNIESEPQELAKIMIVDGCFLLELLIRLGDFIGNNHNSNGRGYANDPILKNEEKLVSVLNDVTMLENQIPFIVLKKIYRKVSPDGSDIDNDHRVANIVRNAFGYPVPETATDKVEMNFVAFNVSRKCR 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2342 242 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 4 222 IPR004158 -
Ssu4g2342 242 PANTHER DUF247 DOMAIN PROTEIN 4 222 - -
Ssu4g2342 242 Pfam Plant protein of unknown function 31 221 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2342 Ssu-Chr4 57038656 57041146 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2342 - - gmx:102659498 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1151 3 27247881 27249248 Ssu4g2342 4 57038656 57041146 PCT