Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2337 ATGTTGCCTCAGAAGCAAGCAGAGGAAGTAATCGTCACAAACCTCAACGAGACAGAACATGAAGTCGGCAGCACAAGGGGTGAAGAGAGGGAACAAGACCAGTCCATGTTCAGCCTCAAGAGCATCCTTTGGCATGGTGGTTCCGTTTGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTCTTGACACTGCCATACTCTTTCTCTCAACTTGGCATGCTATCAGGCATCTTGTTTCAGGTGTTCTATGGAATCATTGGAAGCTGGACTGCTTACCTAATCAGTGTCCTCTACGTGGAGTACCGCACCaggaaggaaaaggaaaacGTCAGCTTCAAGAACCATGTCATTCAGTGGTTCGAAGTCCTTGATGGGTTACTTGGTCCATACTGGAAAGCAGTGGGGCTAGCCTTCAACTGTACTTTCCTCCTCTTTGGATCTGTGATACAACTTATAGCATGTGCAAGTAACATCTATTACATAAATGACAAATTGGATAAACGGACTTGGACTTATATCTTTGGAGCTTGCTGTGCCACTACTGTGTTCATACCATCCTTCCACAATTACCGAATCTGGTCATTCTTGGGTCTTGGAATGACCACTTACACGGCTTGGTACCTTGCTATAGCAGCCATCGCTCATGGCCAGGTAGAAAATGTCACGCACTCGGCTCCAGCAAAGCTAGTGCTATACTTCACTGGAGCCACTAACATACTCTACACGTTCGGGGGACATGCTGTGACTGTAGAGATTATGCATGCCATGTGGAAGCCCCAAAAGTTCAAGTACATCTACTTGCTGGCCACTTTGTACGTTTTCACGCTAACGATTCCTTCCGCCGTCGCCGTTTATTGGGCTTTTGGTGATAAGCTGCTGAACCGCTCCAACGCCTTCTCTCTCCTCCCAAAGTCTCGCTTCCGTGACGCCGCCGTCATCCTCATGCTCATTCACCAGTTCATCACATTTGGGTTTGCGTGTACTCCGTTGTACTTCGTGTGGGAGAAGGTCATTGGGATGCACGACACAAAGAGCATTTGTTTGAGGGCACTTGCACGGTTGCCAGTGGTGATACCAATATGGTTCTTGGCTATTATCTTCCCTTTCTTTGGGCCCATAAATTCAGCTGTTGGGTCTCTACTCGTTAGCTTCACTGTCTACATCATCCCTGCCTTAGCCCATATGCTCACTTACAGAAAAGCCTCTGCCAGACAGAATGCTGCAGAGAAGCCTCCTTTCTTCATGCCAAGCTGGACTGCAATGTATGTCCTTAATGCATTCATTGTGGGATGGGTTTTCATAGTTGGATTTGGGCTTGGAGGATGGGCCAGCATGACCAACTTTATAAGGCAAATTGACACATTTGGACTTTTTGCCAAATGCTACCAATGCCCTCCACCAGCGCCAAAAGTTGCGGCAGCACCACCCCCTCATACCCATCACTAG 1458 0.4739 MLPQKQAEEVIVTNLNETEHEVGSTRGEEREQDQSMFSLKSILWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQVFYGIIGSWTAYLISVLYVEYRTRKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAAIAHGQVENVTHSAPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAVAVYWAFGDKLLNRSNAFSLLPKSRFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTYRKASARQNAAEKPPFFMPSWTAMYVLNAFIVGWVFIVGFGLGGWASMTNFIRQIDTFGLFAKCYQCPPPAPKVAAAPPPHTHH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2337 485 Pfam Transmembrane amino acid transporter protein 45 438 IPR013057 -
Ssu4g2337 485 PANTHER OS05G0424000 PROTEIN-RELATED 3 472 - -
Ssu4g2337 485 PANTHER AUXIN INFLUX TRANSPORTER 3 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2337 Ssu-Chr4 56599423 56606218 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2337 4 468 Organic Solute Cotransporters AT2G21050 78.925 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2337 K13946 - gmx:100778463 922.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1153 3 27268762 27274481 Ssu4g2337 4 56599423 56606218 PCT