Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0928 ATGGCGTCGAGACAGCAATTCAAGGAAGATAGGGCGGAGGCAGCTGCCAAGCTCGCGGCCAAAGACATTGGCGACATCAACAGAGCAAAGGAGCGCGACGAGGGGTACGACTTGCACAACGAAGCGAACTTCAAACAAGCGCGAGCCGAGGCAGCCGCGAAACTCGCTGCTAAGGATCTCGAGGACGTTAATAGATTAAGATCAGACAGCGCATGGAAAGAACCACGTGATGACGAGAGCAAACCCGGTGTGATAGGGTCCATGGTAAGAGCCGCCAAGGAAGCCGTGGTTGGCAAGCCTCACGACGCAGTTGACAACTCCTCACGTGGGGTTTATGACTCTGCCAAAGAGAAGGCAAGGGAAACAAAGGACGAAGGTGGGTCCAAGGTGGGAGAATATGCGTCTCAGAAAGCGAAAGAAACAAAGGACCATGCTGCGGATAAGGCTATGGAAGCTAAAGACACGACAATGCAAAAAGCTGGGGAGTACAAGGATTACACGGCCGAGAAGGCGAAGGAAGGGAAGGACAGTGCGGTGGGGAAGCTTGGGGAGCTGAAGGACTCTGCTGCTGATGCTGCTAAAAGGGCTATGGGTTTCTTCACGGCCAAGAAAGACGAAACAAAGTTGCATGTGATTGTGGTGCAGGAAAGGGTGAGCGGAACGAAGGAGGAAACGAGGCGGAGAATGGAAGAGGTGAGGGTGCAAGATATGGACTACGGAGCGGGGCGGGGTGGGGAGAAGTTGGTGATAAAAATGGAAGAGTCACGGCCGGGAGCGATGGCGGATGCGCTCGAAGCAGCGAATAAGGCCATGGGCGATGTGGAGGAAGAAGGCGTCCTTCATGTGGAGCGTCGtcgggagaaaatgtga 870 0.5368 MASRQQFKEDRAEAAAKLAAKDIGDINRAKERDEGYDLHNEANFKQARAEAAAKLAAKDLEDVNRLRSDSAWKEPRDDESKPGVIGSMVRAAKEAVVGKPHDAVDNSSRGVYDSAKEKARETKDEGGSKVGEYASQKAKETKDHAADKAMEAKDTTMQKAGEYKDYTAEKAKEGKDSAVGKLGELKDSAADAAKRAMGFFTAKKDETKLHVIVVQERVSGTKEETRRRMEEVRVQDMDYGAGRGGEKLVIKMEESRPGAMADALEAANKAMGDVEEEGVLHVERRREKM 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0928 289 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 43 134 - -
Ssu4g0928 289 MobiDBLite consensus disorder prediction 66 83 - -
Ssu4g0928 289 MobiDBLite consensus disorder prediction 95 156 - -
Ssu4g0928 289 MobiDBLite consensus disorder prediction 111 156 - -
Ssu4g0928 289 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 133 273 - -
Ssu4g0928 289 PANTHER EMBRYONIC PROTEIN DC-8-LIKE 1 40 - -
Ssu4g0928 289 Gene3D - 137 203 - -
Ssu4g0928 289 Pfam Late embryogenesis abundant protein 142 185 IPR004238 -
Ssu4g0928 289 Pfam Late embryogenesis abundant protein 132 165 IPR004238 -
Ssu4g0928 289 PANTHER DAUER UP-REGULATED-RELATED 43 134 - -
Ssu4g0928 289 PANTHER DAUER UP-REGULATED-RELATED 133 273 - -
Ssu4g0928 289 PANTHER DAUER UP-REGULATED-RELATED 1 40 - -
Ssu4g0928 289 MobiDBLite consensus disorder prediction 66 85 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0928 - - gmx:547500 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0928 4 14773868 14774801 Ssu4g0928 4 14773868 14774801 ECH
Ssu4g0928 4 14773868 14774801 Ssu7g2512 7 49180961 49182578 PCT