Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0753 ATGGATTTGGAATCTTCCGGCGATTTGGTTAAATGTTGCAAACACCGTGAATGCGGGTGTAGTAATTGCTCCATGGCAGGTCAGTCTTCAGGGAATTGGCTCCGTTCTGTGAAAAGGAAGCATAAGGAGTTGGAGCAGGGCAGGCAATTCCCTGAGCTGGGGCCGGATTGCGATCCGGTGGCACGTGTCgatattgaaaatgaatgtgatGCATTGCGCCAGGCCATCAACAGCCAACAAAAATCAATACAAGATTTGTATGAAGAGTTGGAGGAGGAGAGGAATGCCGCGTCCTCGGCCGCGAATGAGACCATGTCAATGATATTGAGGTTGCAGAGGGAGAAGGCAGAGCTTCAGATGGAAGCGCGCCAGTTCAAGCGATTTGTGGAGGAGAGGACGTCGCACGATCAGCAGGAGCTTTTAGCATTGGAGGATTTGTTGTATAAGAGAGAACAGGTAATTCAGTCGCTCACATGTGAGGTTCAGGCTTATAAGCACAGGTTGATGAGTTTAGGCCTCACTGAATCGGAGGTAGAAGGTGATCAGTATGAATTCCCCCCTTATGAGTACCCTCCTTTGAGATGTAATGCAATGCATGCTTCCATGGATGCTGATAATGATGAGATAGAAATTGAGAAATATGCGTTTGGCGAAACTCCTAGGGACCGTTTGAGGAACCTGGAAAGTAGGATATCTCAAATGGAGAGAAGTCCCACTTATAGCCAGATGGATGGGGAATTCAGTGGGAAAAACATTCTAGAGAAGGTGATAGTTGGACAGTCTCCAAGACGGGCTAAACATTCCGGGAAATTTTCCTGTGACTTGTCTTCGTTATGCCCCGAGTATATGATGGATTCTCCTAGGCTCAGTGGTAGCTTTAGGAAGATAGATTGTTTCTCACAATCAGAGGACCTTTCCAATTTGATGAAGGTGGATAATGCATCAGAAGCTGGTGATGATATGATTGATAAAGTCTATACAATTGACTCTGAGTTCAAAGCTGGAGTTGGTGTTTATGATGATTATGCAACCACTCCAAGGGAGTTTGTTAATCATGTGGATTTTGAAGATCCGTATATAAAGAAGCTTTACATGAGGCTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAAGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTGTTTTACTGAAGGAAATAGCTCAACAACTGTGCAAAGAGATGTCACAGCAAAAGAAAATGACAGCGAGATCTTTTATTGGCAACTTGTCATTCTTGACAGTTTTTAAGTGGATTGCATCAATTGTTTTCTGGAGAAAGAATGCTCATGAAATCAAGTATATGTTCGGGCTACCATCTGACAGCGTGGGCTTGCTAATGCTGCTTGACAAGGGACCCCATGTAAGGTCATGGAGATATCTTCAAAGTACACAAGTGGGAGACTAG 1437 0.4398 MDLESSGDLVKCCKHRECGCSNCSMAGQSSGNWLRSVKRKHKELEQGRQFPELGPDCDPVARVDIENECDALRQAINSQQKSIQDLYEELEEERNAASSAANETMSMILRLQREKAELQMEARQFKRFVEERTSHDQQELLALEDLLYKREQVIQSLTCEVQAYKHRLMSLGLTESEVEGDQYEFPPYEYPPLRCNAMHASMDADNDEIEIEKYAFGETPRDRLRNLESRISQMERSPTYSQMDGEFSGKNILEKVIVGQSPRRAKHSGKFSCDLSSLCPEYMMDSPRLSGSFRKIDCFSQSEDLSNLMKVDNASEAGDDMIDKVYTIDSEFKAGVGVYDDYATTPREFVNHVDFEDPYIKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQQLCKEMSQQKKMTARSFIGNLSFLTVFKWIASIVFWRKNAHEIKYMFGLPSDSVGLLMLLDKGPHVRSWRYLQSTQVGD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0753 478 Coils Coil 360 387 - -
Ssu4g0753 478 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Ssu4g0753 478 PANTHER BNAANNG28530D PROTEIN 1 453 - -
Ssu4g0753 478 Pfam Zein-binding 71 161 IPR007656 -
Ssu4g0753 478 Coils Coil 62 128 - -
Ssu4g0753 478 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0753 Ssu-Chr4 11625523 11627772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0753 - - gmx:100797605 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0753 4 11625523 11627772 Ssu7g2689 7 53995865 53998929 PCT