Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0703 ATGCTTCTGCAATTTTTGTTTGGGGGTCAAGGttctttattgttgtttttttgtgtgtttcatTTTCACATACGTAGGCTCTTGGGGATAACCAAGAGAAGAAAagtgaagaaggagaagatggCTGAAATGACGAAGAATCAACCGTCGCACTGGTGGTGGCTTGATAGCCACACCACTACTAAGCGATCCCCGTGGCTTCAATCCACTCTCGCTGAGCTAAATGAGAAGACAAGGgcaatgttaaaagtaattgAAGAAGATGCAGATTCCTTTGCCAAACGTGCAGAGATGTATTACAAGAAGCGACCAGAGCTTGTGAGCATGGTTGAGGATTTCTACAGGTCACATCGCTCCCTAGCTGAACGCTATGATCAAGTCAAACCTGATACTTGTTCTGGGGGTTCGCCTTTTGCTTCAGCCAAGTATCAGTTAGAGAAGTTGATGAGTTTTTCAGATAGTGGATATGATACCTATTCTGAGCATTGTGATGTGTACGAGTCTGTGGAATCTGAAGTTGATGATCCTGAGCAGGAGGAGGAAGAGGGGACCAAGTTTCTTCATAACTGCACAAGAGAGGAGCAAGTTTCGTTTGTGGCTGTGAGTGACGAAGTGATGAAGCTGAGGGATGAAATTAAGAGACTCAATGAAGAGAACAAGGCTCATAGGGATCAAATCAAGCAGAAGGATACCATTTGTGATGAAGTGATGATGTTGAGGGAAGAAATAGAAAGGCTTAGAGATAAGAACGAGGCTCAGAAGGAACAACTCAAGCAGAAGGATGAAGAGAAGATAGAGGTGATAAGACAACTGAGTTTAGCAGTAGACGTGCTGAAGCAGGAGAATGTGAAGATGAGAAACTTCATCGCTAAGGAGTCTACCAAGAAATGGAAGAACCCATTTGAGTTCAACAAACTTGTGGGAGCATTTTCGGTGAAGTTGTTCAATGGTACTCCAAGGAATCAGCCCAGCGTGGAGCTCTCTAGATGTGGTTAA 996 0.4137 MLLQFLFGGQGSLLLFFCVFHFHIRRLLGITKRRKVKKEKMAEMTKNQPSHWWWLDSHTTTKRSPWLQSTLAELNEKTRAMLKVIEEDADSFAKRAEMYYKKRPELVSMVEDFYRSHRSLAERYDQVKPDTCSGGSPFASAKYQLEKLMSFSDSGYDTYSEHCDVYESVESEVDDPEQEEEEGTKFLHNCTREEQVSFVAVSDEVMKLRDEIKRLNEENKAHRDQIKQKDTICDEVMMLREEIERLRDKNEAQKEQLKQKDEEKIEVIRQLSLAVDVLKQENVKMRNFIAKESTKKWKNPFEFNKLVGAFSVKLFNGTPRNQPSVELSRCG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0703 331 PANTHER PROTEIN NETWORKED 3A-RELATED 50 325 - -
Ssu4g0703 331 PANTHER PROTEIN NETWORKED 4A 50 325 - -
Ssu4g0703 331 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 50 131 IPR011684 GO:0003779
Ssu4g0703 331 Coils Coil 198 270 - -
Ssu4g0703 331 Pfam KIP1-like protein 52 125 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0703 Ssu-Chr4 10984053 10985840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0703 - - gmx:100815707 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0703 4 10984053 10985840 Ssu4g0703 4 10984053 10985840 ECH
Ssu4g0703 4 10984053 10985840 Ssu7g2038 7 40537460 40540405 PCT