Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0482 ATGGCAGACCATGATGCAAAAGAAGAACAAAGGCCCCTCAACCAATGGAAGAGAAGCAAAGGTGGATTCAGGGCTTCCATGTTTATTTTCGTCTTGTCAGCATTGGACAACATGGGTTTTGTGGCAAACATGGTGAGCTTAGTCCTATACTTTTATGGAGTGATGCACTTTGATCTGGCCAGTTCTGCCAACACCCTCACAAACTTTATGGGTTCAACCTACTTGCTTTCCCTTGTCGGAGGCTTCATCTCAGATACATACTTAAACAGATTCACCACATGCTTGCTTTTCGGATCACTCGAGGTTCTGGCTTTGGCCATGCTCACAGTTCAAGCTGCTTCAAATCATTTGCACCCTGAAGCTTGTGGTAAGTCAAGCTGTGTCAAAGGTGGCATAGCAGTCATGTTTTACACATCACTGTGCTTGTTGGCATTGGGAATGGGAGGGGTGAGAGGATCTATGACTGCATTTGGTGCTGACCAATTTGATGAGAAGGATCCAACTGAGGCAAAAGCTCTTGCAAGTTTTTTCAATTGGCTTTTGCTCAGTTCAACTGTGGGAGCAATCACAGGAGTCACTGGTGTTGTGTGGGTTAGCACTCAAAAAGCATGGCATTGGGGGTTTTTCATAATAACCATAGCTTCCTCTGTTGGCTTTGTGACCCTTGCTCTTGGTAAGCCATTCTACCGCATCAAAACTCCAGGAGATAGCCCCACTTTGAGAATTGCTCAGGTCATTGTTGTGGCTTTTAAGAACCGAAAGTTGTCACTGCCGGAGTCACATGGAGAACTACATGAAATTAGTGATAAAGATGCTACAGTAGAGAAGATTGCTCACACCAATCAGATGAGGTTCCTAGACAAAGCGGCCATTGTCCAAGAAAACTCAAAACCCCAGGCATGGAAGGTGTGCACAGTGACACAAGTGGAAGAAGTCAAGATCCTAACCAGAATGTTACCCATAGTAGCCAGTACCATTATACTAAACACTTGTATGGCACAACTCCAAACATTCTCAGTTCAACAAGGGAATGTAATGAACCTCAAACTTGGTTCTCTCACAGTGCCTGCACCATCCATTCCTGTGATCCCCCTTGTTTTCATTAGTGTCCTAGTTCCCATGTATGAACTATTTTTTGTGCCATTTGCAAGAAAGATCACTCACCACCCTTCAGGCATCACACAACTTCAAAGGGTGGGTGTGGGGTTGGTACTCTCAGCAATATCAATGGCAGTGGCTGGGATTGTGGAAGTGAAAAGAAGGGACCAAGGGAGGGAAGACCCTTCTAAGCCTATAAGCCTATTTTGGCTTTCATTCCAATATGGCATATTTGGAATTGCAGATATGTTCACTCTTGTGGGACTATTGGAATTCTTTTACAGGGAATCACCTGCAAGCATGAAATCACTTTCAACCTCTCTCACGTGGTTGTCAACGTCTCTTGGTTACTTCCTGAGCACCGTCTTTGTCAATGTCATCAATGCTGTTACCAAAAGGATCACTCCAAGCAAACAAGGGTGGTTGCATGGCTTCGACTTAAATCAAAATAACCTTGACTTGTTCTATTGGTTCCTAGCCACCCTTAGTTGCCTTAACTTTTTTAACTACCTCTATTGGGCCTCTCGGTACAAGTACAAGCGTGAAGACTCAGGCCCAGGTTTTAAGGCTTTAGGTGACATGCCTATCAAAATGGTTGAGAGAAAACACGATTGGGAAGCCAAGAGTGAAGGACCCTATGCAAATGTTAGAGAATGA 1755 0.4433 MADHDAKEEQRPLNQWKRSKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLASSANTLTNFMGSTYLLSLVGGFISDTYLNRFTTCLLFGSLEVLALAMLTVQAASNHLHPEACGKSSCVKGGIAVMFYTSLCLLALGMGGVRGSMTAFGADQFDEKDPTEAKALASFFNWLLLSSTVGAITGVTGVVWVSTQKAWHWGFFIITIASSVGFVTLALGKPFYRIKTPGDSPTLRIAQVIVVAFKNRKLSLPESHGELHEISDKDATVEKIAHTNQMRFLDKAAIVQENSKPQAWKVCTVTQVEEVKILTRMLPIVASTIILNTCMAQLQTFSVQQGNVMNLKLGSLTVPAPSIPVIPLVFISVLVPMYELFFVPFARKITHHPSGITQLQRVGVGLVLSAISMAVAGIVEVKRRDQGREDPSKPISLFWLSFQYGIFGIADMFTLVGLLEFFYRESPASMKSLSTSLTWLSTSLGYFLSTVFVNVINAVTKRITPSKQGWLHGFDLNQNNLDLFYWFLATLSCLNFFNYLYWASRYKYKREDSGPGFKALGDMPIKMVERKHDWEAKSEGPYANVRE 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0482 584 Pfam POT family 91 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g0482 584 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 557 - -
Ssu4g0482 584 Gene3D MFS general substrate transporter like domains 2 550 IPR036259 -
Ssu4g0482 584 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu4g0482 584 SUPERFAMILY MFS general substrate transporter 5 546 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0482 Ssu-Chr4 7681873 7685102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0482 17 550 Organic Solute Cotransporters AT1G69850 42.504 6.92e-149 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0482 K14638 - gmx:102670258 1081.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0482 4 7681873 7685102 Ssu7g1852 7 37292061 37294548 PCT