Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2755 ATGGCAAATCTAGTTCCTGGGGTCCTTCTAAAACTTATGCAGCACATGAACACAGATGTGAAAGTTGCTGGCGAGCATAGGTCCTCTCTCTTGCAAGTGGTGAGCATTGTTCCCGCACTTGCTGGGGGTGAGTTGTTCCCCAATCAAGGCTTTTATCTCAAGGTTTCTGACTCCTTGCATGCCACCTATGTTTCTCTCCCTGATGAACATGATGATCTCATCCTCAGCGACAAGATTCAACTGGGGCAGTTTGTTTTTGTGGATCGTTTGGAGGCAGCTTCACCAGTTCCTATTCTTCATGGGGTTAGGCCTGTTCCTGGGAGACACGCTTGTGTTGGAACCCCCGAGGACATTGTTGCAACAACTCACTTACTTGGGTTCCTTAGTAATGCTAAGGCTATCAAGAGCAGTGTTTGTTCTGGTCCCTTGGACTTAGAGAGATCCAAGTCTCCGAGGAAAGTGGTGGGCAATGAGAAGGATAAGAAGGAGAAAGTAAGATTGAATAATGAAGAGCAATTAGACAAGAAACCAGTGCTTTTTGCTAGGAGTAAATCTCAGGCAACAAAAGCAGTGGCAAATGTTGTTGATGTGAAGAAGGAACCGTTGGTGAGATTGAAGTCACTGAATTCAAGGACCATTCCTTCTTCCCCCACTAGTTGCTATTCTTTGCCTACTTCTTTTGAGAAATTTGCCAATGGGGTGAAGCAGCAGGCAAATATCAAGGGAGTGGACAAGCTAACTGCTAAGGTGGGAGTGGTGGAGATAGGAAAGGGTGTCCGTGGAGCTAGTCCAACCGGGAAGAGAATTTCCGTGGGAAACCCGATCAGAAATTTGGTTCAGGGAATTGAGCTTGGGGCTAAGGTGCTGCGTAAGAGCTGGGAAGGGAATTTGGAAGTCAAGAATAAAGAGACATCCAAATTAAGGGCTGCCAAGTGTGATCCTAAGCCTGAGACTCCTAGGAGAAGTACTTCAAGTGAAAAGTTGCCCTCCAAAGAAGAGAGCAAGATGCAACTGCCGACAAAGTCTTCCAAGGAAGAGCACAAGACTCAAACGTCTATAAAGAAAGTTGTTGCCAATGGAACTATGGAAGAACAAGGAAAGTCAAGTAAGCAAAGAGTTTCTGCtggaaaaaaattgtcaaaagttTCTAACACTGGATTCCCTGGAAACTTGGTCAAAGTTTCTCCAAATAGTAGAAAAGTGACAGATGCAAGTGTTCAATGGGCTTCACTGCCGTCATCTATTGCAAAGCTTGGGAGGGAAGTGATGAAGCACAGAGATACAGCACAGATGGCCGCAACTGAGGCTATACAAGAGGCTGCCGCTGCTGAGAGTTTGCTGCAATGTCTAAGTGTATACGCAGAGCTAAGTAATTCTGCTAAGGAACATAACCCGCAGCCTGCAGTAGAGCAGTTCTTAACTCTTCATGCTAGCCTAAATAGCGCGCAGATGATTGCTGACGCCCTATCTAAACCCATTCCAGATGATTCTTCTCCGGATAATGAAAGAAGCATAACAGAAGAAGCACTAAAACTCAAATCAGATAGACAAAAGCATGCGAATTCTTGGGTCCAGGCTGCTTTATCCACCAATCTATCATCCTTTTCTGTTTATAACCGAGAACCTCTATCATCCAAGCTTCCAGTTTCAACCAACtctcaaaaccaaaaaaatatcctGGGAAGTAAACCAATGCTAGTTATAGAAAATTCAAGTGAAGATGCTTCATCAAAGTCTCATGGAAAAACCCGTCAGATGGCTAATTCCAAACATGCCTTGCAAGGAACTCCTCGCAAAGCAGGTGACGCATTAGCAAATGGACACAAGCAACTAGTCCAATCGCCGCCGCAGTGGGTTAGAGGAAATGGCCTTGATGAGGTGGTTGATTTGGCTGACATGCTGCAACTGCGGTCGCGGGACTGGTTTTTGGTGTTTGTTGAGAGATTCTTGGACACTGATGGGGACACTAGCTTGTCAAATAATGACCAAATAGCAGGTATGCTCACTCAACTGAAAAGTGTGAATGATTGGCTTGATGAGATAGGGTCTAGCAAGAATGAAGGAAAGTCATGCCAGATACCAGCAGAGACAATTGACCGACTGAGGAAGAAGATATATGAATATCTTCTTACACATGTTGAATCCGCTGCCGCCGCACTCAGTGGTGGATCACAATCATCACCTCGGATCCAAACAGCAGAGATCAAAGCCAAAAAGTGA 2220 0.445 MANLVPGVLLKLMQHMNTDVKVAGEHRSSLLQVVSIVPALAGGELFPNQGFYLKVSDSLHATYVSLPDEHDDLILSDKIQLGQFVFVDRLEAASPVPILHGVRPVPGRHACVGTPEDIVATTHLLGFLSNAKAIKSSVCSGPLDLERSKSPRKVVGNEKDKKEKVRLNNEEQLDKKPVLFARSKSQATKAVANVVDVKKEPLVRLKSLNSRTIPSSPTSCYSLPTSFEKFANGVKQQANIKGVDKLTAKVGVVEIGKGVRGASPTGKRISVGNPIRNLVQGIELGAKVLRKSWEGNLEVKNKETSKLRAAKCDPKPETPRRSTSSEKLPSKEESKMQLPTKSSKEEHKTQTSIKKVVANGTMEEQGKSSKQRVSAGKKLSKVSNTGFPGNLVKVSPNSRKVTDASVQWASLPSSIAKLGREVMKHRDTAQMAATEAIQEAAAAESLLQCLSVYAELSNSAKEHNPQPAVEQFLTLHASLNSAQMIADALSKPIPDDSSPDNERSITEEALKLKSDRQKHANSWVQAALSTNLSSFSVYNREPLSSKLPVSTNSQNQKNILGSKPMLVIENSSEDASSKSHGKTRQMANSKHALQGTPRKAGDALANGHKQLVQSPPQWVRGNGLDEVVDLADMLQLRSRDWFLVFVERFLDTDGDTSLSNNDQIAGMLTQLKSVNDWLDEIGSSKNEGKSCQIPAETIDRLRKKIYEYLLTHVESAAAALSGGSQSSPRIQTAEIKAKK 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2755 739 MobiDBLite consensus disorder prediction 544 561 - -
Ssu3g2755 739 MobiDBLite consensus disorder prediction 571 602 - -
Ssu3g2755 739 MobiDBLite consensus disorder prediction 720 739 - -
Ssu3g2755 739 PANTHER EXPRESSED PROTEIN 1 738 IPR010341 -
Ssu3g2755 739 PANTHER DUF936 FAMILY PROTEIN 1 738 - -
Ssu3g2755 739 Pfam Plant protein of unknown function (DUF936) 4 720 IPR010341 -
Ssu3g2755 739 MobiDBLite consensus disorder prediction 353 394 - -
Ssu3g2755 739 MobiDBLite consensus disorder prediction 301 352 - -
Ssu3g2755 739 MobiDBLite consensus disorder prediction 544 563 - -
Ssu3g2755 739 MobiDBLite consensus disorder prediction 301 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2755 Ssu-Chr3 81850662 81854897 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2755 - - gmx:100805079 1242.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0356 8 5787416 5792368 Ssu3g2755 3 81850662 81854897 PCT