Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2707 atGGGTGGTGCTAGTGTAGTTTTCTCAATGGCACTAGTAACCCTAGTGGCTCTAACACCCTCACCCATCAGCTCCTGCCCTTCCTCTGAATGGGCAGCACTCATGGCCTTCAAAGCATCCCTCACCGAACCCTACTCGGGTTTCTTCCGTTCATGGAGAGGCACCAACTGCTGCTACCACTGGCACGGCATCAGCTGCGACCCCACCACGCGCCGCGTCACCGAAATCACCCTCCGCGGCCCCGGCAACGTCATCACCGGCCACATCTCCCCCTCCATCTGCAACCTCACGCAACTCTCCAGCATCACCGTCACCGACTGGAAGGGCATTTCCGGAAACATCCCTCGCTGCGTCACGACGCTCCCTTTCCTCCAAATCATCGACCTCTCCGGAAACCTCATCCACGGCCAAATTCCCTGGGACATAGGGCGCCTCACGCAACTTACGCTGCTCAACCTCGCAGACAATCACATCTCGGGCAGAATCCCGGGAACGCTGGTGAAGCTCTCCAACCTCATGCAACTGGACCTGCGAAACAACGCCATCAAGGGCCCAATTCCCCGGGACTTGGGCCGCCTGAAGAAACTCAACCGGGCCTTGCTGAGTCATAACCGGATAACCGGCCCAATCCCTTGGTCGATTTCGGAAATTTACGGGCTCGCGGACCTGGACCTCTCGCTGAACCGCTTGTCCGGTTCGATTCCGGCTTCGCTGGGCCGCATGCAGGTTCTGGACTCGCTGAACTTGAAGTATAACAACCTAACGGGGAACATTCCGTGGACCGTGTTGGGCTCGAGAATGAGCCATTTGGATCTGAGTAGGAACGCGTTGAGTGGGCGCATACCCAATGCGTTGGGAGAGAATTCGTATTTCATAAGCCTTGATTTGTCGCATAACAACTTGAAGGGTCCGGTTCCTAAGTCCATGGCGTTGGCCACGTACATTGGGTACTTGGACTTGAGTCATAATAACCGTCTATGTGGCCGCCTGCCACGTGGCGGGCCCTTCAACCACATTCAGCCGCTAAAACCCTGCTCTCGTGCCTCCGGTGACACACATGCGTGA 1065 0.5681 MGGASVVFSMALVTLVALTPSPISSCPSSEWAALMAFKASLTEPYSGFFRSWRGTNCCYHWHGISCDPTTRRVTEITLRGPGNVITGHISPSICNLTQLSSITVTDWKGISGNIPRCVTTLPFLQIIDLSGNLIHGQIPWDIGRLTQLTLLNLADNHISGRIPGTLVKLSNLMQLDLRNNAIKGPIPRDLGRLKKLNRALLSHNRITGPIPWSISEIYGLADLDLSLNRLSGSIPASLGRMQVLDSLNLKYNNLTGNIPWTVLGSRMSHLDLSRNALSGRIPNALGENSYFISLDLSHNNLKGPVPKSMALATYIGYLDLSHNNRLCGRLPRGGPFNHIQPLKPCSRASGDTHA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2707 354 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 354 - -
Ssu3g2707 354 Gene3D Ribonuclease Inhibitor 81 348 IPR032675 -
Ssu3g2707 354 SUPERFAMILY L domain-like 25 328 - -
Ssu3g2707 354 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 354 IPR045273 -
Ssu3g2707 354 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Ssu3g2707 354 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Ssu3g2707 354 Gene3D Ribonuclease Inhibitor 23 80 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2707 Ssu-Chr3 81009760 81010824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2707 77 336 Receptor kinase-like Gene Family AT5G62230 34.572 8.82e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2707 - - gmx:100778852 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2707 3 81009760 81010824 Ssu3g2707 3 81009760 81010824 ECH
Ssu8g0403 8 6486303 6487400 Ssu3g2707 3 81009760 81010824 ECH