Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2649 ATGAGTAAACTTGGTACTTGCAGTATCGAGGTTGACAAGAGGAACCCCGTGTGCATCTTCCGCTCTCGCTTTCGCTCTCTACTACCAGCCTACGAAATTCAAGTCAAAATGGAAGACGGTCATAAGTTCCAGGAAATTTCAAAGCCAAAATATGATTGTCTTTTATTTGATCTTGATGACACCCTTTATCCCTTTAGTTCTGGAATGTCAGCGCAAATAGCAAAAAATATTGAAGAGTTTATGATTCAAAAGCTTGGGATGGAGGCTGCCGAAGTTGCCGAATTAAACAATCCATTATATAAGACTTATGGGACATTGATGGCTGGTCTAAGGGCAATTGGCTATGACTTTGACTATGATGACTTTCATAGTTTTATCCATGGGAGATTGCAATATAATGTGCTACTGAAACCAGACCCTGTTCTCAGGGGCATTTTACAAAGCCTGCCTGTTAGGAAAGTTATTTTTACAAATGCAGATTCGAACCATGCATTTAGAGCGCTTAAAAGCCTTGGACTGGAGGACTGCTTTGAAAGAATTATAAGCTTTGACACTCTGAATTCCTCCAGCACCACCAATTCTCCTTACGATAAAGATGGCAGTGAATCCAGATCAACCACCGCAGGAATTTTTGACTTTTGTGAGCACATACGCCGGCCTGATTCTGATATGGTGCTTCCAAGGACCCCAGTTGTCTGCAAACCCTTTGATGATGCATTTGAAGACGTTTTCAAGTTAGCAGACATTGACCCTCAAAGAACATTGTTCTTTGATGACAGTGTCCGCAATTTATTGACAGCCAAACACTTGGGCCTCCACACAGTCGCGGTGGGTACATCCGTTCGTACCGAAGGAGTTGATCATGCTTTGGAGAGTATTCACAATATCAGGGAGGCATTTCCAGAGCTTTGGGATGCCGACGAGAAGCATGAAATTGTCCAGTACAAGGTTGGAATCGAAACATCAGTAAAAGCTTAG 978 0.4254 MSKLGTCSIEVDKRNPVCIFRSRFRSLLPAYEIQVKMEDGHKFQEISKPKYDCLLFDLDDTLYPFSSGMSAQIAKNIEEFMIQKLGMEAAEVAELNNPLYKTYGTLMAGLRAIGYDFDYDDFHSFIHGRLQYNVLLKPDPVLRGILQSLPVRKVIFTNADSNHAFRALKSLGLEDCFERIISFDTLNSSSTTNSPYDKDGSESRSTTAGIFDFCEHIRRPDSDMVLPRTPVVCKPFDDAFEDVFKLADIDPQRTLFFDDSVRNLLTAKHLGLHTVAVGTSVRTEGVDHALESIHNIREAFPELWDADEKHEIVQYKVGIETSVKA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2649 325 SFLD C1.5.3: 5'-Nucleotidase Like 47 306 IPR010237 -
Ssu3g2649 325 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 37 325 - -
Ssu3g2649 325 SFLD Haloacid Dehalogenase 47 306 - -
Ssu3g2649 325 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 37 325 - -
Ssu3g2649 325 Gene3D - 116 304 IPR023214 -
Ssu3g2649 325 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 229 277 IPR006439 -
Ssu3g2649 325 SUPERFAMILY HAD-like 53 282 IPR036412 -
Ssu3g2649 325 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 52 276 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2649 Ssu-Chr3 80110947 80117288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2649 K07025 - gmx:100807717 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0445 8 7085539 7087482 Ssu3g2649 3 80110947 80117288 PCT