Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2549 ATGGATAAGGAAACTGAGTTGCAAGACATTGTGGAGGAGAATGAGAACTTGAATCTAAAGCTTCAAGAGAGCATGTCATCCCAAAATGAGCATGAACTTAAAGGGgaaattaaaagattagaaGAATGTGTGGCTGAACTAAAGGCAGATATGATGGACAAGGAGACAACACTGCAAAgcataaatgaagaaaatgaaatgctGAAGATGGAAATCAACAAGCTCTCAGATGGTGGCAAAGTGAGTGAGGAAATTACTGCCATAGTAGAGGGAGCCAAGGCCACGAAACGTGAGGCTCTCATGAAACTTGGGATTGTGATGGAGGAAGCAGATAGGACCAACAAGAAGGCTGCAAGTGGCTGA 363 0.3967 MDKETELQDIVEENENLNLKLQESMSSQNEHELKGEIKRLEECVAELKADMMDKETTLQSINEENEMLKMEINKLSDGGKVSEEITAIVEGAKATKREALMKLGIVMEEADRTNKKAASG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2549 120 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 3 1 118 - -
Ssu3g2549 120 Coils Coil 7 27 - -
Ssu3g2549 120 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 118 IPR029688 -
Ssu3g2549 120 Coils Coil 30 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2549 Ssu-Chr3 78177896 78178258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2549 - - gmx:100798862 173.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2549 3 78177896 78178258 Ssu3g2549 3 78177896 78178258 ECH
Ssu8g0534 8 8597486 8601688 Ssu3g2549 3 78177896 78178258 PCT