Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g2251 | ATGGCAAGGGGAACTTTTGCAAACATTCGCCTTGTTAACAAGCTCCTGAATGGGGAAGTTGGCCCAAAGACAATTCACATTCCAACTGGGGAAAAGCTTTATGTGTTTGATGCAGCAACGAGATACAAGGCTTCTGGGCAAGACACCATTGTGCTCGCTGGAGCTGAATATGGTAGTGGAAGTTCTAGAGATTGGGCTGCCAAGGGTCCAATGCTGCTGGGAGTCAAAGCTGTGATAGCTAAAAGTTTCGAGAGAATTCATCGCAGTAATTTGGTAGGAATGGGTATTATTCCTCTGTGCTTCAAATCCAGTGAGGATGCGGACACATTGGGATTGACTGGTCATGAATGTTATACGATTGACCTCCCAAGTAAAATCAGCGAGATTAGGCCTGGCCAAGATGTGACAGTCACAACCGATAATGGAAAATCTTTCACCTGCACAGTACGCTTTGACACTGAGGTCGAACTTGCTTACTTCAACCACGGAGGCATACTTCCATATGTCATAAGGAACCTCATTAAGCAGTGA | 531 | 0.4539 | MARGTFANIRLVNKLLNGEVGPKTIHIPTGEKLYVFDAATRYKASGQDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSSEDADTLGLTGHECYTIDLPSKISEIRPGQDVTVTTDNGKSFTCTVRFDTEVELAYFNHGGILPYVIRNLIKQ | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g2251 | 176 | SUPERFAMILY | LeuD/IlvD-like | 1 | 174 | - | - | |
| Ssu3g2251 | 176 | Pfam | Aconitase C-terminal domain | 1 | 102 | IPR000573 | - | |
| Ssu3g2251 | 176 | Gene3D | Aconitase, domain 4 | 1 | 175 | IPR015928 | - | |
| Ssu3g2251 | 176 | PANTHER | ACONITATE HYDRATASE | 1 | 176 | - | - | |
| Ssu3g2251 | 176 | PANTHER | ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER | 1 | 176 | IPR006249 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu3g2251 | Ssu-Chr3 | 72441095 | 72442216 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu3g2251 | K01681 | - | gmx:100778506 | 340.502 |
Event-related genes