Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1417 ATGGATTGTAGCAATGACAAGGAGCCATGGGATTGGCATAGGGAGGATTATTGTCTCCAAAAGAGTTTCAATTATGCTGAAATTTCACAAGGGCTGTGGAATAATGTTCCTCAAAATGAAGATCTTTCCTATGTGTTCAATGATGAAACAACCCCGGTGAAGGCTTGTGGGGAATTTGCATACGATGTCAATAATAGTGAgtcaaataatatacaaaaggAACAAGACAAATGTTTGAAGAGTTCTTACCAAATTAAGAGACGGCGAATGCTACAATTCAATACTCAAGATGGGGGTCATTCCCTTTCCAAGGAACAAATGTCTTCAGCATATTTGAAAGTAAAGGGGAAGGAGGATTCAAATGTGGATGTTTACCCAGAATTATCTCATTGGGTGTCCGGAGCATCAGGAAGTGCATCTGCTTCCAATTATGAGGACCTTGAGTCAGCTGAAGGGTGGCTAGCAGATTGCTTTAAGGATGATGAAATGCAATTATGTCCTGATGATTTGAATTTTTCTGGGGCAGATGATGTTCATATTGATGTTGCAGATCTGTGCAACTTCCCACCAGCATGTGAACAACATGTGGTTCAGCATCGCATCACTCAAACCTCCAAAAATATTGTCTTCAaggGTGGGAAATCATTTATAGAAACACCCAAAAAGCTAGCTTCTTCTGTGGCCTATCCATTTTCCTTCATTAAACCCAGTGGTGCCCATGGAGATGTCACTTTGAAGGAAATAAATCAGTGCATTCTGTCTCCACCTCCTTTGAAATCCAAACAAAGTATGGAAGATCCATCAGCTTACCCAAAATCAGTCTTTTCTGGGAAGCCCGTAgttggaaaaacaaaaattcaaattgaaggGGGAAAAGGTAGCATCACAATTGTGAGAACCAAAGGCTAA 909 0.3872 MDCSNDKEPWDWHREDYCLQKSFNYAEISQGLWNNVPQNEDLSYVFNDETTPVKACGEFAYDVNNSESNNIQKEQDKCLKSSYQIKRRRMLQFNTQDGGHSLSKEQMSSAYLKVKGKEDSNVDVYPELSHWVSGASGSASASNYEDLESAEGWLADCFKDDEMQLCPDDLNFSGADDVHIDVADLCNFPPACEQHVVQHRITQTSKNIVFKGGKSFIETPKKLASSVAYPFSFIKPSGAHGDVTLKEINQCILSPPPLKSKQSMEDPSAYPKSVFSGKPVVGKTKIQIEGGKGSITIVRTKG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1417 302 PANTHER INDUCED TRANSCRIPT PROTEIN, PUTATIVE-RELATED 3 302 - -
Ssu3g1417 302 PANTHER PROTEIN XRI1 3 302 IPR039933 GO:0007140|GO:0007143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1417 Ssu-Chr3 36504385 36507989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1417 - - gmx:100779466 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1417 3 36504385 36507989 Ssu2g0553 2 32078726 32089358 PCT