Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1062 ATGGTATCTCCAAAACTAGCTATCATCACTGCACTAGCATTGGTCTCCTTCATTTTCGTCAATGAATCTGATGGTGCTTCTCACTACCCTTCTGGTGTACATGCTGCCAGTGCTGAGATTACAGCACTTGCTTCTCAGAAAGTTAATCTTTCAGTGTACTATGCAAGCCTATGCCAACCTTGTGCAACTTTCATTGTTAATCTGGAGCAAATCTTCCAcaacaatatcatcaacatTGTCAATCTCCAGTTAATTCCTTGGGCCAATGCTTCCGTCGATAAGACTAAGCATTCCATAATATGTCAGAATGGCCCTGATGAATGCGAGCTAAATTCATTGGAAGCTTGTGCCATCAATGTTTGGAATGATGTGAACAAACATTATGGTTTGATTAACTGCTTTGAGTTTCTGGCAATTGACGGAAGGCACAAGAATTGGGAGGACTGTTTCAGCCAATTGGATTTGCCCAAGGAACCTATTCTGAATTGCTATAACAGAGGAAATGGAACAGAGATtggactaaaatatattaatgaaactGCTCCCCTTTACACACCCTACGAATTTCTGCCTTGGGTGGTGGTAAACAATCAATCTATTGGAAAGgaatatgaaaattttacacgATATGTTTGTGAGGCTTATAGAGGCACTCCCGTTCCAGAAGCATGCAACCTTCATTAG 684 0.383 MVSPKLAIITALALVSFIFVNESDGASHYPSGVHAASAEITALASQKVNLSVYYASLCQPCATFIVNLEQIFHNNIINIVNLQLIPWANASVDKTKHSIICQNGPDECELNSLEACAINVWNDVNKHYGLINCFEFLAIDGRHKNWEDCFSQLDLPKEPILNCYNRGNGTEIGLKYINETAPLYTPYEFLPWVVVNNQSIGKEYENFTRYVCEAYRGTPVPEACNLH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1062 227 PANTHER GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT 2 225 IPR004911 GO:0016671
Ssu3g1062 227 PANTHER GAMMA INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE 2 225 - -
Ssu3g1062 227 Pfam Gamma interferon inducible lysosomal thiol reductase (GILT) 50 152 IPR004911 GO:0016671
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1062 Ssu-Chr3 24891169 24893356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1062 K08059 - gmx:100306044 370.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1062 3 24891169 24893356 Ssu3g1062 3 24891169 24893356 ECH
Ssu3g1062 3 24891169 24893356 Ssu4g2418 4 60377327 60377755 PCT