Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0921 ATGGCAGCTGCCACTGGTTTAGGTGCCGTGCCGTTCTTCTTTGTGGAGCTTGATCCACAGTGGGCTGGATTATGCAATGGAATGGCTGCAGGTGTCATGTTGGCTGCGAGCTTTGATCTGATACAGGAAGGGCAGGAGTATGGTGCTGGAAATTGGGTTGTCACTGGGATTCTAGCCGGTGGAATCTTTATTTGGCTATGTAAGAAGTTTCTTGAGCAATATGAGGAAGTAAGCATGTTGGATTTAAAAGGTGCTGATGCTGCCAAAGTTGTTCTTGTTATTGGAATAATGACTCTCCATTCTTTTGGGGAGGGATCTGGTGTTGGGGTCTCATTTGCTGGATCAAAGGGTTTCACTCAAGGCCTGTTGGTAACTTTGGCTATTGCGGTACACAACATACCAGAGGGATTAGCTGTGAGCATGGTGCTGGCATCAAGAGGTGTCTCTCCACAGAATGCTATGTTATGGAGCATTATTACGTCTTTACCCCAGCCAATTGTAGCCGTTCCTTCATTTATTTGTGCCGATGCATTCAGCAAGTTTCTTCCTTTTTGTACGGGATTTGCTGCTGGATGCATGATTTGGATGGTTGTTGCAGAAGTGCTCCCTGATGCTTTCAAGGAAGCCTCAGCTTCACAAGTTGCATCCGCTGCAACCCTTTCTGTAGCATTTATGGAAGCTCTCAGCACCTTCTTTCAGAATTTCAGCCATGACTACAACTCTGAGGATGCTTCTGgcttttttgtttcattactTTTTGGCCTTGGCCCTTTACTTGGAGGGATTATTCTGGTTGTATTTGCTCTTGCTTTTCATCTTCAGCATGCTCTCCTCATGGGCACCGCATGTGGTATTGCCTTTGTTCTTGGTGCCTGGCGACCTGTGCAGCTTATTTTGTCTTCAAAATTGGGGTTTATTCCCGTTTTGTTACTCCTGGCAATAGGGGCTGCTTTCATCCATGTTTCTTCCTCTGGTGTATTGAAGGTGGCAGCGTCCAAAAAGGCCTCAGTCAATGACTTGCCTACACTCACTGGTTTCCCACTCAGTGTTCACACACTCCAATCATTCATATCATGCGGTGCAGTTGCTTTTCACGCTTTGGCTGAAGGACTTGCGTTGGGAGTAGCTGCACCAAAAGCATATGGACTTGGTCGTCACATGGTCCTTCCAGTCTCTCTACATGGGCTTCCTCGAGGTGCAGCTGTGGCTAGCTGCATATTTGGAGCCACTGATAGCTGGCACGGTTCTCTTGCAACAGCTGCCATAATTGGATTTATGGGTCCAATATCAGCAATAGGAGCTATTCTTACTGGTATTGACTATAGTGGTCTTGATCACATAATGGTTCTTGCCTGTGGTGGATTAATCCCTAGCTTTGGAAATGTAGTAAAGAGAGCTCTAAGTTTGGACAAGCGGAAGAGCACCTGTGGCCTCATTATGGGCATTGGGTTTGCTACTTTATGTCTAACATTCACTAGGTTGGTTTGCTTACATACACCTTACTGCAATTCTGCACCAGAGGCTGTCAGATAA 1533 0.4579 MAAATGLGAVPFFFVELDPQWAGLCNGMAAGVMLAASFDLIQEGQEYGAGNWVVTGILAGGIFIWLCKKFLEQYEEVSMLDLKGADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFTQGLLVTLAIAVHNIPEGLAVSMVLASRGVSPQNAMLWSIITSLPQPIVAVPSFICADAFSKFLPFCTGFAAGCMIWMVVAEVLPDAFKEASASQVASAATLSVAFMEALSTFFQNFSHDYNSEDASGFFVSLLFGLGPLLGGIILVVFALAFHLQHALLMGTACGIAFVLGAWRPVQLILSSKLGFIPVLLLLAIGAAFIHVSSSGVLKVAASKKASVNDLPTLTGFPLSVHTLQSFISCGAVAFHALAEGLALGVAAPKAYGLGRHMVLPVSLHGLPRGAAVASCIFGATDSWHGSLATAAIIGFMGPISAIGAILTGIDYSGLDHIMVLACGGLIPSFGNVVKRALSLDKRKSTCGLIMGIGFATLCLTFTRLVCLHTPYCNSAPEAVR 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0921 510 PANTHER BNAA05G29570D PROTEIN 1 300 - -
Ssu3g0921 510 Pfam ZIP Zinc transporter 84 210 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu3g0921 510 PANTHER ZINC/IRON TRANSPORTER 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0921 Ssu-Chr3 21978515 21983535 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0921 - - gmx:100800396 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0921 3 21978515 21983535 Ssu3g0921 3 21978515 21983535 ECH
Ssu3g0921 3 21978515 21983535 Ssu2g0927 2 46335864 46341564 PCT