Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0927 ATGATCCTGAATTGCCCATTGCCACGATTTTTATCCAATAAATGTGAATACGTCAATTCTTTGCTATGGAGTTGTAACTTGTGCAAAATTCGATTTGGGGCCTCTGGGTGGGTGGGTGGCAGGCATTTCCAACACAACATTAGCATGGCTCCTAATCCGAGGCCCAAGTTGTGTGTTCCATTCTTCTTGTTACTGCTAATGCTTCTTTCCTTGGGTTATTCCAATGCTGAATTCGAGCAGAAGCTCAGAGCTGCTCCACACAAGAATGTGATTGATGGCACTGGTGTGGAGAATTCCCTCAAGTTTGAGGAAACCAATGACAGAAAAGGTGGAAGCAATAGAGTTTCGGTTTCCACGGTTGCTTTGTTCACATTGGCAATGGCAGCTGCCACTGGTTTAGGTGCTGTGCCCTTCTTCTTTGTGGAGCTTGATCCACAATGGGCAGGGTTGTGCAATGGGATGGCAGCTGGTGTCATGTTGGCTGCGAGCTTTGATCTCATACAGGAAGGTCAGGATTATGGCGCTGGGAATTGGGTTGTCATTGGGATTCTAGCTGGTGGCATCTTTATTTGGTTTTGTAAGAAGTGTCTTGAGCAATATGGGGAAGTAAGCATGTTGGATATAAAGGGCGCTGATGCAGCCAAAGTTGTTCTTGTAATTGGAATAATGACTCTCCATTCTTTTGGAGAGGGATCTGGGGTTGGGGTCTCATTTGCTGGCTCAAAGGGTTTCTCTCAAGGCCTGTTGGTAACTTTGGCTATTGCGGTACACAACATTCCAGAGGGATTGGCTGTGAGCATGGTGCTGGCATCGAGGGGTGTCTCTCCACAGAATGCTATGTTGTGGAGCATTATTACATCTTTACCTCAGCCAATTGTAGCCATTCCTTCATTTATTTGTGCTGATGCATTTAGTAAGTTCCTGCCTTTCTGTACGGGGTTTGCTGCTGGATGCATGATCTGGATGGTTGTTGCAGAAGTGCTTCCGGATGCATTCAAgGAAGCCTCTGCTTCACAGGTTGCATCAGCAGCAACACTTTCAGTAGCATTTATGGAAGCTCTAAGCACCCTTTTTCAGAATTTCAACCATGACTACAACTCTGAGGATGCTTCCGGCTTCTTTGTTTCATTACTTTTTGGCCTTGGCCCATTACTTGGTGGGATTATTCTGGTTGCATTTGCTCTTGCTTTTCGTCTTCAGCATGCTCTCCTCATGGGCATAGCATGTGGTATTGCCTTTGTTCTTGGTGCCTGGCGACCAGTGCAGCTCATTTTGTCTTCAAAATTAGGATTTGTTCCTGTTGTGTTACTCCTTGCAATGGGTGCTGTTTTCATCCACGTTTCTAGCTCTGGTGTATTGAAGGTGGCTGGTCGCAAGAAGACCTCAGTCAATGACTTGCCTACGCTCACAGGCATCCCAGTGAGCGTTCAAACCCTTCAATCATTCATATCATGCGGTGCAGTTGCTCTACATGCTTTGGCTGAAGGACTTGCACTGGGAGTAGCTGCACCGAAAGCATATGGATTTGGTCGCCACATGGTCCTTCCGGTCTCTCTACATGGGCTCCCTCGAGGTGCTGCTGTTGCTAGCTGCATCTATGGTGCCACTGATAGTTGGCATGGTTCTCTTGCAACAGCTGCCATAGTTGGATTTATGGGCCCAATATCAGCAATTGGATCTATTCTTGCTGGGATTGATTACAGTGGTCTTGATCACATAATGGTTCTGGCTTGTGGTGGAATAATTCCAAGTTTTGGAAATGTAGTTAAGAGAGCACTTAGCTTGGACAAGCAAAAGAGCACCTGCGGCATCATTATGGGAATTGGATCTGCTACCTTGTGTCTAACATTCACTAAATTAGTTTGCTTGCACACACCTTACTGCAATTCTGCACCAGAGGCTGTTAGATAA 1911 0.461 MILNCPLPRFLSNKCEYVNSLLWSCNLCKIRFGASGWVGGRHFQHNISMAPNPRPKLCVPFFLLLLMLLSLGYSNAEFEQKLRAAPHKNVIDGTGVENSLKFEETNDRKGGSNRVSVSTVALFTLAMAAATGLGAVPFFFVELDPQWAGLCNGMAAGVMLAASFDLIQEGQDYGAGNWVVIGILAGGIFIWFCKKCLEQYGEVSMLDIKGADAAKVVLVIGIMTLHSFGEGSGVGVSFAGSKGFSQGLLVTLAIAVHNIPEGLAVSMVLASRGVSPQNAMLWSIITSLPQPIVAIPSFICADAFSKFLPFCTGFAAGCMIWMVVAEVLPDAFKEASASQVASAATLSVAFMEALSTLFQNFNHDYNSEDASGFFVSLLFGLGPLLGGIILVAFALAFRLQHALLMGIACGIAFVLGAWRPVQLILSSKLGFVPVVLLLAMGAVFIHVSSSGVLKVAGRKKTSVNDLPTLTGIPVSVQTLQSFISCGAVALHALAEGLALGVAAPKAYGFGRHMVLPVSLHGLPRGAAVASCIYGATDSWHGSLATAAIVGFMGPISAIGSILAGIDYSGLDHIMVLACGGIIPSFGNVVKRALSLDKQKSTCGIIMGIGSATLCLTFTKLVCLHTPYCNSAPEAVR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0927 636 PANTHER BNAA05G29570D PROTEIN 105 393 - -
Ssu2g0927 636 Pfam ZIP Zinc transporter 209 336 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Ssu2g0927 636 PANTHER ZINC/IRON TRANSPORTER 105 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0927 Ssu-Chr2 46335864 46341564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0927 - - vra:106772981 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0921 3 21978515 21983535 Ssu2g0927 2 46335864 46341564 PCT