Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0920 ATGGAGGAGTTGGTGGGTGTGACTGCTTGTGTTTTAGGTGACATGGCTTCAAGGCCTAATTTTGGGTTGAATGAACTAGACTTTGTCTTTTCAACTTTGGTTGTTGGGGCTATCCTCAATTTCACTCTCATGTATCTGTTGGCACCTACCATGACATCATCAGCATCCAACCTACCGGCCCTCTTTGCCTCATGTCCCAAGAGTCACATGTTTGAGCCTGGTGCCTATTCCCTTCTGGATAGGTTTGGAACCTTGGTGTTCAAAGGGACCATTTTTGCTGTTGTTGGCTTTGGTGCTGGACTTGTTGGAACCACAATTTCAAATGGGTTGATCAAGATGAGGAAGAAGATGGATCCCAGCTTTGAGACCCCCAACAAGCCCCCACCCACCTTTTTGAATGCTCTCACATGGGCTGGTCACATGGGGGTTAGCAGCAATCTGAGGTACCAGACTCTGAATGGTATTGAGTTCATGTTGGAGAGGGTGCTTAACCCCTTGGCATTCAAGTCCTCAGTGGTGGTGCTGAGGTGTGTGAACAATGTTCTTGGGGGCATGACCTTTGTGGTGTTGGCAAGGTTGACTGGAGCACAAAGTGTTGGGGAGCAGAAGGAGAATGAGGTTGCTTTGATTGCTGAGAAGGAGAAGGTGGAGTCAGAGAGGGAAGAGGGGTTGCAGAATAATCAGTCGACAACACCATCAAAGTGA 705 0.4823 MEELVGVTACVLGDMASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPTMTSSASNLPALFASCPKSHMFEPGAYSLLDRFGTLVFKGTIFAVVGFGAGLVGTTISNGLIKMRKKMDPSFETPNKPPPTFLNALTWAGHMGVSSNLRYQTLNGIEFMLERVLNPLAFKSSVVVLRCVNNVLGGMTFVVLARLTGAQSVGEQKENEVALIAEKEKVESEREEGLQNNQSTTPSK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0920 234 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 1 214 - -
Ssu3g0920 234 MobiDBLite consensus disorder prediction 213 234 - -
Ssu3g0920 234 Pfam Protein RETICULATA-related 1 155 IPR021825 -
Ssu3g0920 234 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0920 Ssu-Chr3 21971002 21971706 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0920 - - gmx:100815884 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0920 3 21971002 21971706 Ssu2g0929 2 46347375 46347911 PCT