Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g0929 ATGGCGGCGACGGGGTCGGCCGaggcggcggaggaggagggAGACTCCGACGGTGACGGCGTCGGATTCGGGGTTGTGGGAATGGTCGTAAATGGGTGGAGATCGAGGGTAGCCGCCGACCCACAGTTCCCTTTCAAGGTTTTGATGGAGGAATTAGTAGGTGTGAGTGCCGCCGTCGTCGGCGACATGGCCACGCGCCCCAACTTCGGTCTCAACGAACTGGACTTCGTTTTCTCAACCCTCGTCGTAGGTTCCATTCTCAACTTCATCCTCATGTACCTCTTGGCGCCCACCTTGTCCTCTTCGTCCACGCTTCCTTCGATCTTCGCCACGTGTCCCAACAGCCACATGTTCGAACCGGGTCCCTACGGGCTTCTGGACCGGGTCGGGACGCTGGTGTACAAGGGGGCCGTGTTTGCCCTCGTTGGGCTCGGGCCGGGCTCGTCGGGACCGCGATTTCGAACGGGCTGGTGGCGACGAGGAAGAGGGTGGACCCGAACTTCGAGAGGCCCAACAAGGCTCCCCCTACGGTTCTGA 537 0.5922 MAATGSAEAAEEEGDSDGDGVGFGVVGMVVNGWRSRVAADPQFPFKVLMEELVGVSAAVVGDMATRPNFGLNELDFVFSTLVVGSILNFILMYLLAPTLSSSSTLPSIFATCPNSHMFEPGPYGLLDRVGTLVYKGAVFALVGLGPGSSGPRFRTGWWRRGRGWTRTSRGPTRLPLRF 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g0929 178 PANTHER PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE 8 151 - -
Ssu2g0929 178 Pfam Protein RETICULATA-related 36 148 IPR021825 -
Ssu2g0929 178 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 8 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g0929 Ssu-Chr2 46347375 46347911 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g0929 - - aprc:113849401 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0920 3 21971002 21971706 Ssu2g0929 2 46347375 46347911 PCT