Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0699 ATGGACTTCTGGCTCTCTTTCATGGCTGTGATTAGCACTTTTCTTTATCTGGCTACCATTGATGAAGTATTTAAGAGGGCAATCCACACAGCTGTTGCTATCCTTACCGCCCTAATGGCTGCAACAAAAGCAACCAGGGCTTccaatgttgttgttgtgattgtGATTGGTGTTCTTGGTCTCCTTATTGGATGGTTGATAGAGATCTTAACAAAGTATAGGTCCCTTTCCTTTTCAATTGGAGTCTCAGTTAATTTCTCTCATTGTTTCCAAACTATAAAGCGTTGGCTCTATAATCTTGTCAAGACACTATTGAGACGGTACCACTGGGCTTTTGCCTTGGCTGGTTTTACTGCATTGGCCATGGCAGCAATAAGCTGGACACTTGAAACCAGTGAAACCTACTGGTTCTGGCATAGCATTTGGCATATTACAATATACACatcatctttcttcttcctttgttCAAAAGCAAATATTGAGGATAGTGAGAATCAGCTTCCTACCAATGGAAACTATGAACTGACTCATCAGGATTCACTTCCAAGAAGTGATTAG 558 0.3817 MDFWLSFMAVISTFLYLATIDEVFKRAIHTAVAILTALMAATKATRASNVVVVIVIGVLGLLIGWLIEILTKYRSLSFSIGVSVNFSHCFQTIKRWLYNLVKTLLRRYHWAFALAGFTALAMAAISWTLETSETYWFWHSIWHITIYTSSFFFLCSKANIEDSENQLPTNGNYELTHQDSLPRSD 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0699 185 Pfam Protein of unknown function (DUF3522) 1 144 IPR021910 GO:0016021
Ssu3g0699 185 PANTHER BNAC04G50700D PROTEIN 1 183 - -
Ssu3g0699 185 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 1 183 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0699 Ssu-Chr3 16896420 16903534 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0699 - - gmx:100787532 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0699 3 16896420 16903534 Ssu4g2814 4 71650899 71660000 PCT