Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0691 ATGTCCACCATGAGCAACAACCTCAAAGATTCAGATCACTTCCACTCTTCATGGACCATAACAAAACTAATGACCTCCTTCTTCCTCTTAGTCTCCCTTTCCTACCTCTTCTACACCCTAGGATTCCTCACCCATTCATATGATTGTGCCCCAAAAAAGCCTTCCCATTACATTAATCTTCCCACTACCACCCACTtttccaacactccccctcCACCATCCCATGACCCCTTTGAGAAAACCAACATTTCCCACATAGTGTTTGGCATAGGGGCCTCATCCAAGCTATGGAGCCACAGAAAAGAATACATCAAGCTGTGGTGGAGGCCCAATGAGACAAGGGGCAACGTGTGGCTAGACCAAGGAGTGAAAACTGAGCCCGGCGATGAGTACTTCCTTCCCGCGTTGAAAATATCCGGTGACGTCTCGAGGTTCAAGTGCAGGAATCCACGTGGCGACAGGTCGGGGATTCGCATATCTCGCATAGTGTCGGAGACCGTGAGGCTTGGGATGGAGAATGTGAGGTGGTTTGTGATGGGGGACGATGACACTTTCTTTGTGACCGAGAATTTGGTGAAGGTGTTGCGAAAATATGACCACggtcatttttattatattgggACCTCTTCGGAGAGCCACTTGCagaatattcatttttcttataatatggCTTTTGGGGGTGGAGGGTTTGCCATTAGTTACCCCTTGGCTTTGGCGTTGGAGGGAATGCAGGACAAGTGCCTCCAGAGGTACCCTGCATTGTATGGCTCAGATGATAGGATCCAGGCTTGCATGGCAGAGCTTGGTGTTCCTCTCACCAAGGAGATTGGCTTTCACCAGtttgatGTGTACGGCAACGTGTTTGGGCTCCTAGCAGCTCATCCCATCACACCGCTAGTATCCATGCATCACTTGGACCTGGTTGAGCCCATATTTCCAAATGTGGACCGGATTCAGGCGCTACAGCGACTTAAAGAGCCTATGAAACTGGACTCGTATGGGCTTATGCAACAATCCATTTGCTATGACAAAGCCCGTCGTTGGACCATATCCGTGTCTTGGGGCTATGTGGTTCAAATATTCCGGGGCATTTTCCTGGCCCGGGATATGGAGATGCCGGCGAGAACCTTTCTGAATTGGTATCGCCGGGCAGATTATACCGGATTTCCGTTTAACACGCGCCCATTCAGCCGGCATTTTTGTCAGAaaccttttgttttttacttgTCTAATGCAACCTATGATGGGGTTGCTAATGAGACTGTGAGTGAGTATATTCGGGTCCAACCCAACCCGGAGTGCAAATGGAAAATGGCAGATCCAACCCAAATCCAAATGATAAAGGTCCATAAGAAACCCAACTCGCATTTGTGGGACAAGTCTCCAAGAAGACATTGTTGCAGGGTTCAACCAACAAAGGAAGAAGGAACTCTGGTGATTGACGTGGGAGAATGCAGAAAAGGTGAATTTGTTGGTAAATAG 1482 0.4622 MSTMSNNLKDSDHFHSSWTITKLMTSFFLLVSLSYLFYTLGFLTHSYDCAPKKPSHYINLPTTTHFSNTPPPPSHDPFEKTNISHIVFGIGASSKLWSHRKEYIKLWWRPNETRGNVWLDQGVKTEPGDEYFLPALKISGDVSRFKCRNPRGDRSGIRISRIVSETVRLGMENVRWFVMGDDDTFFVTENLVKVLRKYDHGHFYYIGTSSESHLQNIHFSYNMAFGGGGFAISYPLALALEGMQDKCLQRYPALYGSDDRIQACMAELGVPLTKEIGFHQFDVYGNVFGLLAAHPITPLVSMHHLDLVEPIFPNVDRIQALQRLKEPMKLDSYGLMQQSICYDKARRWTISVSWGYVVQIFRGIFLARDMEMPARTFLNWYRRADYTGFPFNTRPFSRHFCQKPFVFYLSNATYDGVANETVSEYIRVQPNPECKWKMADPTQIQMIKVHKKPNSHLWDKSPRRHCCRVQPTKEEGTLVIDVGECRKGEFVGK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0691 493 PANTHER FRINGE-RELATED 1 492 - -
Ssu3g0691 493 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 1 492 - -
Ssu3g0691 493 Gene3D - 73 328 - -
Ssu3g0691 493 Pfam Protein of unknown function, DUF604 215 467 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0691 Ssu-Chr3 16784326 16789399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0691 20 488 Glycosyltransferase AT5G41460 59.470 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0691 - - gmx:100777888 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0691 3 16784326 16789399 Ssu4g2825 4 72090083 72095691 PCT