Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3051 ATGATTCAGAACACTGATATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCGGCTCCTTGTTCATCTTGCATGCATCTTAACAATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCTTAGGAGAGGCTAATAATCAGTATTCTATGGATGAGGGTAATGTGTATTCTCTTAGGAGCAGAGCTTGTGAAAGCAGACAGCACACTGTCAGTGAAGCAAGTAATATGCAGAGTGTTAATTCAAGTCATGATTCTGTGTCTGAAAATGCTGAGAGTAGACAGATCATACTGAATAAGTATCAGGATTCCAAGTATTTAGAAGGTCATGATGACAACACTTCTTGTATTAGTAGAGCCAGTGATGCTAATTTAGTGAATGATAGCCATCAAAGGAATGCAGAGAGAATAAATGGATCTTGTAGTTCAGCTTCAGTTAGTCATTTAGGAGCAGAAGGATCTGGAAGTGCTCCTTCTGTTGACATGTCTGGTTTGGAAATTCCATCTTCTAAAGAAGTAGACACTGGTTCATCATTGACCAAAGAGAGGGAACCTGTTGTTACTGGTGAGAAATATATTGCTGTTAAGGATGGCCTTATTGAGAGTACTTCCAAGATTTCACTAAAAGTATGTACAAAGTCGGAAGCAGATACCGATGTCTGTGATGCTAACAATGAAGATCCTAAATGTTCAGTTCATGATGGACAACAGGAGAAAGCTGAAGAGCTGGTTAAATCGCCTGGCAAGCAGGAAATTCAGTCTGAAGATGAGAGTGATGGATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGACATCTGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGACGGGGCAGAGCACACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGGGATTGGTTATGTGAAGAATGCAAAGATGCAGaggagaatgaaaataaaagactGGATGTTGACGACAAAAAAATGGTTGAAGTTAGTTCAACTTCACAAGTTGCTGGCAAAAGACTTTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAATACAGGATCACCAAAGACGTCAAGTCCCAAGAGATTAATTCCACTGTCCCGAGAATCTTCATTTAAGAGCTTagataaatcaaaaatgaagCCTGGTCTTCTGATGCCTAATCGAAAGCACTCTGGTGGTAATGACACAGAGATTGCTCGTTCTCCTTCCATGGGCCCCCGGGGTCAAAATTCAAAGGGTATATTGTTGAAGTCTAATTCATTCAACAACTTAAACTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTGGTTCCCTCAAAATCAAAAGGGGCTAATGAACATACTTCAAAGAACTTGGAGATACCTGCTCGGATGACTGGCAAATCAACATTATTCAAATCCTCAAGTTTGGGGCGATCAAATGCAACTGAATCAAAAGTTAGAATGCTTTCACCCAAGTCTGCGACTACTCAGGATTTGAAAGGATCTAGACACTTAAAAGAATCAGGTGCATTTGACAGGAAATTTCTGTCTAGGATTGATCGGCCTGTGGCTAGTTCTGTTGTTTCCACTCCTAAGGGTGATCAAAAGCTTACACCTCGTGCTGAAACCACTAAACCTTCAGCAGTTAACAACAATCGAGAGTTGAAGGTTAACCAGGATGGAAAATCAAGTTCATTACCAAGGTCAATGAGTAATATAAGTCGTAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGAACATCAACCCGTGTTGATGAAGCTCAACAGGATGTGCTGCCTCAATCACAAGAGACTGCAAATCAGGTTGAGAAAAGCAGAGATAGTTCTAGTGATTGTGTAAGGCCAGCGATTCCTACTTCTTCAAAAAATCCACTCTGTCAAAAATGTAAGGAATTTGGCCATCCTTTGGAATGTTGCCCAGCTGGTACTACACAGGAATCTGGTGCTGAAATATCTGTCACTGCCTCAAGTAGTTCAAAAGAGGAGATGCATAAAGACAATATATTGAAAGCTGCAATCCAGGCTGCTTTACTTAGAAGGcctgaaatttacaaaaagaaagagGTATCTAATCAAACTGATGAGGTTTCTACCTCAGGCACAGAGTTGAATTGTGAAGTGACTTCAAAAGACCAAGTGTTGGTTTCCAGCACACTGAAGAATGGTATACCTGCTGATGAAACCCATGACCAACAGGAAATCCTTGAGAATTCTACATCAGATTCTTCCAAATGTTCATCTGCCAATGATTTGAAGCTACTTAACTCTTGTCCACCTGACTTTCAGTCCCAACCAGGAAAGTCAGATTCCATTGGTCTTGCACCTGGAAAGCCTGTAGTGAGAGACTTGTCTAATAAAGCTGTGACAACCTCAAGCGTTCCCTCAAAGATGTTGGCCTTTCCTGAATATGAATACATCTGGCAGGGTGTCTTTGAAGTGCATAGAAATGGGAAGCCTCCTGATTTATATAGTGGACTTCAGGCACATTTATCCTCTTGTGCTTCTCCTCAGGTTCTTGGTGTAGTGAACAAGTTTCTACCCAAAATTCCCCTCAATGAAGTTTCTCGCTTGAGCATGTGGCCTTCACAATTTCATCATGGTGGTGCTAGTGAAGATAATATTGCTCTGTACTTCTTTGCCAGGGATGTTGAAAGTTATGAGAGACACTACAAGGGTCTATTGGATCACATGATTAGAAATGATTTAGCACTTAAAGGAATTTTTGATGGTGTCGAACTTCTGATATTCCCTTCCTATCAGCTTCCAGAAAATTCACAGCGCTGGAATATGTTGTTTTTCTTATGGGGCATATTTAGGGGGAGGAGGATCAATCATTCAGATTCTGCAAAAAAGATTTGTATTCCCAGTTTGAATGTAATTCCAGTTGAGGAGAAATCTTCAACTGCTGTTTTGACTATGCCTGAAACACATTGTTCACCAAAGTGCAATGATGAAGAATCAATTGATTGTGATAAAGCATGCAATGCACTTCTCCCATTCTCTTCCGTAGACCAACATCAGATTACTGGAAGTAGGAATATTGATGTCAACGATCAGACACATTTGGGTTCTCAAGTAAACTTAGAGAAGCTAGATGGTAGGATTGACTCAAAATCTACATCAAGGGTTCCAACAAGCAGTACTCTGTTGTGTCAAGAAATGAAATCCACTGGTTCATCCCTGAAAGCTAGTGTACTTGAACAAGGACAGTGCAGAGAGTCTAAACCTCCTGAAGCAATGGGAAAAATTGTAAGTAGTAGGATTGTTGAAACAAAAACTGAGTCTGATATTTTTGTCAAGCAAGAGAACGCCCCTTCTTTGATGATTCTTTCTGAAAAAGATGTTGCAAGCAATATTAGTAAGGAtaaaattttggagaaaatgaACAGTGATGAAGACCAGGAAAGGcctaagaagaaacaaaaagaggatTGTCACTATATTGATTTGGAGGCAAATATTGACAATCAAGAAACAGATGCTGCAAGCAATTTTAGTAAGGATAAAAATTCGGTAACAACTATTGGTGATGAAGATCAGCAAAGGCCTAACAGGAAACAGAAAGATAATCATTATATTGACTTGGAGGCAACTGTTGAAGATCAAGAAACAGACATTGTAAGCAATATGAGTGAGGataaaatttcagaaaaaatgGACAGTGAGCAAGATCGGCAATGGCTTAAGAGGAAACACAAAGAAGATGATCACTATATTGACTTGGAGGCAACTTTTCATGGAGACCCAAGTGTAGAAGGGATCATCTGTTCCCTACCTAATGATAAGGTTCAGCATGTAGATCTTTCTGACACAATTATGCAGGGTTCTGCTGTTAGTTGTCAGAAAATGCCTTGGCATGAGGGAAATGCTAAGTTAGAAGACACAAAAAGTTCTGGCAAGAAGCTTAAGACAGGTTTCAGTGGGATTTATGGTTCTGGAGGTAGAGACTCTTTCAATGACAGTTTTACATCTCTTGGAAATGATCTTGGTTCCTGTTCTTCGGTTGAGGACAAAGGATGTGAAGAAGCTTGTGATGAGAAAATCAACCGTGAGGACTTGGGAGGAACGATGGAAAGAACCTTCTTTCCAGTTGGTACACAGAATACTAGCAACTCACTATCAGTGCTGAATAGCATGTCAACCAAAGGGGTTGGTGAGTACGAGGATGGGATTCCCAATCTGGAGCTTGCCTTAGGTGGCAAAACAAAACCACCACCGGCTGCGCCTAAGGGTATGCTGCCTTTCTTAGTTGGGGCAGTAGACAGGAAAAATAACCGCCCAGATTGCTTGGGAGATGGGcaggatgatgatgatgttgctGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTCCAAACAAGGAACACACAATAGCTGCGGACCTTTTGCCTGATGTGAACACCTCGTGGCTCCtttttgggaaaaaataa 4494 0.3992 MIQNTDMRLESGTCNVCSAPCSSCMHLNNALMGSKAEEFSDENCRLGEANNQYSMDEGNVYSLRSRACESRQHTVSEASNMQSVNSSHDSVSENAESRQIILNKYQDSKYLEGHDDNTSCISRASDANLVNDSHQRNAERINGSCSSASVSHLGAEGSGSAPSVDMSGLEIPSSKEVDTGSSLTKEREPVVTGEKYIAVKDGLIESTSKISLKVCTKSEADTDVCDANNEDPKCSVHDGQQEKAEELVKSPGKQEIQSEDESDGSDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENENKRLDVDDKKMVEVSSTSQVAGKRLSDNIEVAPAAKRQALESNTGSPKTSSPKRLIPLSRESSFKSLDKSKMKPGLLMPNRKHSGGNDTEIARSPSMGPRGQNSKGILLKSNSFNNLNSKPRVKLVDEVVPSKSKGANEHTSKNLEIPARMTGKSTLFKSSSLGRSNATESKVRMLSPKSATTQDLKGSRHLKESGAFDRKFLSRIDRPVASSVVSTPKGDQKLTPRAETTKPSAVNNNRELKVNQDGKSSSLPRSMSNISRKSLEPQVSSERTSTRVDEAQQDVLPQSQETANQVEKSRDSSSDCVRPAIPTSSKNPLCQKCKEFGHPLECCPAGTTQESGAEISVTASSSSKEEMHKDNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSGTELNCEVTSKDQVLVSSTLKNGIPADETHDQQEILENSTSDSSKCSSANDLKLLNSCPPDFQSQPGKSDSIGLAPGKPVVRDLSNKAVTTSSVPSKMLAFPEYEYIWQGVFEVHRNGKPPDLYSGLQAHLSSCASPQVLGVVNKFLPKIPLNEVSRLSMWPSQFHHGGASEDNIALYFFARDVESYERHYKGLLDHMIRNDLALKGIFDGVELLIFPSYQLPENSQRWNMLFFLWGIFRGRRINHSDSAKKICIPSLNVIPVEEKSSTAVLTMPETHCSPKCNDEESIDCDKACNALLPFSSVDQHQITGSRNIDVNDQTHLGSQVNLEKLDGRIDSKSTSRVPTSSTLLCQEMKSTGSSLKASVLEQGQCRESKPPEAMGKIVSSRIVETKTESDIFVKQENAPSLMILSEKDVASNISKDKILEKMNSDEDQERPKKKQKEDCHYIDLEANIDNQETDAASNFSKDKNSVTTIGDEDQQRPNRKQKDNHYIDLEATVEDQETDIVSNMSEDKISEKMDSEQDRQWLKRKHKEDDHYIDLEATFHGDPSVEGIICSLPNDKVQHVDLSDTIMQGSAVSCQKMPWHEGNAKLEDTKSSGKKLKTGFSGIYGSGGRDSFNDSFTSLGNDLGSCSSVEDKGCEEACDEKINREDLGGTMERTFFPVGTQNTSNSLSVLNSMSTKGVGEYEDGIPNLELALGGKTKPPPAAPKGMLPFLVGAVDRKNNRPDCLGDGQDDDDVAASLSLSLSFPSPNKEHTIAADLLPDVNTSWLLFGKK 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 486 519 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 148 186 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 486 512 - -
Ssu2g3051 1497 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 347 IPR013083 -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 72 96 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 756 790 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 363 429 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 1193 1212 - -
Ssu2g3051 1497 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 1489 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 539 638 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 542 638 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 1142 1164 - -
Ssu2g3051 1497 PANTHER - 7 1489 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 366 384 - -
Ssu2g3051 1497 SUPERFAMILY FYVE/PHD zinc finger 263 323 IPR011011 -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 1177 1192 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 1176 1212 - -
Ssu2g3051 1497 MobiDBLite consensus disorder prediction 743 797 - -
Ssu2g3051 1497 SMART PHD_3 274 321 IPR001965 -
Ssu2g3051 1497 ProSiteProfiles Zinc finger PHD-type profile. 272 323 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3051 Ssu-Chr2 92143639 92151562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g3051 - - gmx:100806639 2442.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g3177 3 87845401 87851937 Ssu2g3051 2 92143639 92151562 ECH
Ssu2g3051 2 92143639 92151562 Ssu2g3051 2 92143639 92151562 ECH