Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2957 ATGGCCAAGCCCGAGAGCCGCACCAACCTGGCCTCATGTTTCGTGGCCACCGTTTTCTTAATTCTCCTTCTGATGGTGGTGTTCGTTGTTTACTTCACGGTGTTCAAGCCCCAGGACCCCAAAATCGCCGTGAGCGCCGTCCAGATCCCTTCCTTCTCCGCCACTAACGGCAACGCCAACTTCACGTTCTCCCAGTACGCCTCCGTTCGGAACCCTAACCGAGGCACCTTCTCCCACTACGACAGCTCGCTCCAGCTTCTCTACTACGGCAGACAGGTCGGCTTTATGTTCGTCCCCGCCGGCAAGATCGACGCCGGAAGAACTCAGTACATGGCCGCCACATTCACCGTCCAGTCCTTCCCGTTGGGCCTGGGGTCCACCCCTGTCAGTGGGCCCAGCAATGTGGGGCCCACGATGGAGATCGAGTCGAGAATAGAGATGACGGGGCGAGTGAGGGTGTTGCACCTTTTCAGTCACCACGTCGAGGCCAAAGCTCAATGCAGGGTCGCCATCGCCGTCACAGATGGAACCGTCTTAGGTTTTCATTGCTAA 552 0.5797 MAKPESRTNLASCFVATVFLILLLMVVFVVYFTVFKPQDPKIAVSAVQIPSFSATNGNANFTFSQYASVRNPNRGTFSHYDSSLQLLYYGRQVGFMFVPAGKIDAGRTQYMAATFTVQSFPLGLGSTPVSGPSNVGPTMEIESRIEMTGRVRVLHLFSHHVEAKAQCRVAIAVTDGTVLGFHC 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2957 183 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 3 183 - -
Ssu2g2957 183 SUPERFAMILY LEA14-like 20 123 - -
Ssu2g2957 183 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Ssu2g2957 183 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2957 Ssu-Chr2 91078934 91079485 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2957 - - gmx:100820289 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2957 2 91078934 91079485 Ssu2g2957 2 91078934 91079485 ECH
Ssu2g2957 2 91078934 91079485 Ssu5g3164 5 79893496 79894125 PCT