Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2955 ATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGGTATCAACCTCATCTAATAGCTCCCGAACAAGGATACCGTCGCCTCATTGAATCTTCTCTAACCACTATCAGGGGTCCAGCTGAGGCAGCTGTTGATGCGGTTCATTCCCTATTAAAGGACCTGATTCACAAAGCTATTAGTGAGACTCTGGACTTGAAGCAATATCCTGGTCTGCGTGTTGAGGCTGGGAATGCAGCCATTGATTCGCTAGAAAGAATGAGGGAGGAAAGCAAAAGAGCAACGCTACAGCTAGTTGATATGGAGTGTGGCTATTTAACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTTGATAAGGGTGGCAATCCTACACATTCAATTTTTGATAGATATAATGATTCATACCTTAGGCGAATTGGAACCAATGTTCTGTCTTATGTCAATATGGTCTGTGCAAGTCTGCGGCATTCAATTCCTAAGTCAATTGTCTATTGTCAAGTGCGGGAAGCCAAACGAGGCCTACTTGATCACTTTTTCACTGAGCTAGGCAAAATTGAGCCCAAGCGTCTGTCCTCATTGCTGAATGAGGATCCTGCAATCATGGAAAGACGAAGTGCCCTCGCAAAGAGGCTTGAGTTATACAGGAGTGCACAAACTGAGATTGATGCAGTTGCATGGTCTAAGTAG 687 0.4367 MENIRKLITEADGYQPHLIAPEQGYRRLIESSLTTIRGPAEAAVDAVHSLLKDLIHKAISETLDLKQYPGLRVEAGNAAIDSLERMREESKRATLQLVDMECGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTNVLSYVNMVCASLRHSIPKSIVYCQVREAKRGLLDHFFTELGKIEPKRLSSLLNEDPAIMERRSALAKRLELYRSAQTEIDAVAWSK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2955 228 Gene3D Dynamin, middle domain 1 204 - -
Ssu2g2955 228 PANTHER DYNAMIN 1 227 IPR022812 -
Ssu2g2955 228 PANTHER DYNAMIN-LIKE PROTEIN 1E 1 227 - -
Ssu2g2955 228 Pfam Dynamin central region 1 106 IPR000375 -
Ssu2g2955 228 Pfam Dynamin GTPase effector domain 132 224 IPR003130 GO:0003924|GO:0005525
Ssu2g2955 228 ProSiteProfiles GED domain profile. 136 228 IPR020850 -
Ssu2g2955 228 SMART GED_2 131 224 IPR003130 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2955 Ssu-Chr2 91004968 91007503 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2955 - - gmx:100819043 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2955 2 91004968 91007503 Ssu2g2955 2 91004968 91007503 ECH
Ssu2g2955 2 91004968 91007503 Ssu5g3160 5 79868167 79874152 PCT